@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0986: (2016-04-27 )
MNRQPIVQLSNLSWTFREGETRRQVLDHITFDFEPGEFVALLGQSGSGKSTLLNLISGIEKPTTGDVTINGFAITQKTERDRTLFRRDQIGIVFQFFNLIPTLTVLENITLPQELAGVSQRKAAVVARDLLEKVGMADRERTFPDKLSGGEQQRVAISRALAHNPMLVLADEPTGNLDSDTGDKVLDVLLDLTRQAGKTLIMATHSPSMTQHADRVVNLQGGRLIPAVNRENQTDQPASTILLPTSYE

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]
22 PsiBlast_CBE 89.7442%-100 - C1 -3TIF - Y796_METJA -
2 PsiBlast_PDB 89.2342% -98 - C1 -3TIF - Y796_METJA -
113 Fugue 88.2833% -94 - C1 -3TUZ - METN_ECOLI -
125 HHSearch 87.9735% -95 - C1 -3TUI - METN_ECOLI -
3 PsiBlast_PDB 87.5242% -95 - C1 -1F3O - Y796_METJA -
1 PsiBlast_PDB 87.5042% -96 - C1 -1L2T - Y796_METJA -
21 PsiBlast_CBE 87.4242% -98 - C1 -1L2T - Y796_METJA -
10 PsiBlast_PDB 86.8637%-110 - C1 -3TUZ - METN_ECOLI -
30 PsiBlast_CBE 86.7337%-106 - C1 -3TUI - METN_ECOLI -
9 PsiBlast_PDB 86.0737%-106 - C1 -3TUI - METN_ECOLI -
31 PsiBlast_CBE 85.5137%-102 - C1 -3TUI - METN_ECOLI -
28 PsiBlast_CBE 85.0437%-101 - C1 -3TUZ - METN_ECOLI -
27 PsiBlast_CBE 84.8237%-107 - C1 -3TUZ - METN_ECOLI -
29 PsiBlast_CBE 84.6937%-104 - C1 -3TUZ - METN_ECOLI -
32 PsiBlast_CBE 83.6437%-107 - C1 -3TUI - METN_ECOLI -
6 PsiBlast_PDB 83.2842%-105 - C1 -4U00 - ? -
7 PsiBlast_PDB 82.4842%-103 - C1 -4U02 - ? -
26 PsiBlast_CBE 82.3942%-104 - C1 -4U02 - ? -
25 PsiBlast_CBE 82.0842%-107 - C1 -4U02 - ? -
24 PsiBlast_CBE 81.6042%-102 - C1 -4U02 - ? -
93 PsiBlast_CBE 76.6331% -90 - C1 -3FVQ 7.7 FBPC_NEIG1
94 PsiBlast_CBE 73.7831% -88 - C1 -3FVQ 7.0 FBPC_NEIG1
86 PsiBlast_CBE 73.4536%-106 - C1 -1B0U 4.3 HISP_SALTY
85 PsiBlast_CBE 72.5631% -92 - C1 -4MKI 2.2 ECFA2_CALS4
84 PsiBlast_CBE 71.2731% -93 - C1 -4MKI 4.1 ECFA2_CALS4