@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1009: (2016-04-27 )
MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDDLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAASRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAVAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAINTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAGAR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SUGAR_A_6(4KPM)
RPFB_MYCTU
[Raw transfer]
-
BEN_B_9(4EMN)
RPFB_MYCTU
[Raw transfer]



BEN_C_12(4EMN)
RPFB_MYCTU
[Raw transfer]



SUGAR_A_6(4KPM)
RPFB_MYCTU
[Raw transfer]
-
BEN_B_8(4EMN)
RPFB_MYCTU
[Raw transfer]



BEN_B_8(4EMN)
RPFB_MYCTU
[Raw transfer]
50 Fugue 97.52100% -64 - C5 -5E27 - RPFB_MYCTU -
29 HHSearch 97.21100% -64 - C5 -5E27 - RPFB_MYCTU -
1 PsiBlast_PDB 97.21100% -64 - C5 -5E27 - RPFB_MYCTU -
52 Fugue 79.9397% -35 - C5 -3EO5 - RPFB_MYCTU -
51 Fugue 65.27100% -55 - C5 -1XSF - -
2 PsiBlast_PDB 65.27100% -55 - C5 -1XSF - -
24 PsiBlast_CBE 61.39100% -44 - C5 -4KPM Error RPFB_MYCTU
25 PsiBlast_CBE 61.14100% -40 - C5 -4KL7 - RPFB_MYCTU -
22 PsiBlast_CBE 60.80100% -36 - C5 -4EMN 3.1 RPFB_MYCTU
5 PsiBlast_PDB 60.37100% -43 - C5 -4KPM 4.5 RPFB_MYCTU
3 PsiBlast_PDB 59.99100% -37 - C5 -4EMN 3.6 RPFB_MYCTU
31 HHSearch 58.77100% -37 - C5 -4EMN 3.6 RPFB_MYCTU
4 PsiBlast_PDB 58.53100% -41 - C5 -4KL7 - RPFB_MYCTU -
23 PsiBlast_CBE 58.37100% -36 - C5 -4KPM - RPFB_MYCTU -
21 PsiBlast_CBE 58.24100% -37 - C5 -4EMN 2.8 RPFB_MYCTU
56 Fugue 57.6818% -39 - C3 -1ZR6 - ? -
27 PsiBlast_CBE 52.3857% -23 - C5 -4OW1 - RPFC_MYCTU -
7 PsiBlast_PDB 51.7757% -19 - C5 -4OW1 - RPFC_MYCTU -
26 PsiBlast_CBE 51.3557% -19 - C5 -4OW1 - RPFC_MYCTU -
32 HHSearch 49.9555% -19 - C5 -4OW1 - RPFC_MYCTU -