@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1011: (2016-04-27 )
MPTGSVTVRVPGKVNLYLAVGDRREDGYHELTTVFHAVSLVDEVTVRNADVLSLELVGEGADQLPTDERNLAWQAAELMAEHVGRAPDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLGSDVPFALHGGTALGTGRGEELATVLSRNTFHWVLAFADSGLLTSAVYNELDRLREVGDPPRLGEPGPVLAALAAGDPDQLAPLLGNEMQAAAVSLDPALARALRAGVEAGALAGIVSGSGPTCAFLCTSASSAIDVGAQLSGAGVCRTVRVATGPVPGARVVSAPTEV

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CDM_A_3(2V2Z)
ISPE_AQUAE
[Raw transfer]



ATP_A_2(4ED4)
?
[Raw transfer]



ATP_A_3(4DXL)
?
[Raw transfer]



CDM_A_2(3PYE)
ISPE_MYCTU
[Raw transfer]



ANP_A_2(3PYF)
ISPE_MYCTU
[Raw transfer]



ANP_A_2(3PYF)
ISPE_MYCTU
[Raw transfer]



ANP_A_4(1OJ4)
ISPE_ECOL6
[Raw transfer]



ADP_A_4(2V2Z)
ISPE_AQUAE
[Raw transfer]



ADP_A_3(2WW4)
ISPE_ECOLI
[Raw transfer]



ADP_B_4(2WW4)
ISPE_ECOLI
[Raw transfer]



ADP_A_2(3PYG)
ISPE_MYCTU
[Raw transfer]



GVS_A_3(2VF3)
ISPE_AQUAE
[Raw transfer]



CDM_A_3(1OJ4)
ISPE_ECOL6
[Raw transfer]



CDP_A_3(2V8P)
ISPE_AQUAE
[Raw transfer]



C5P_A_2(4EMD)
?
[Raw transfer]



CTN_A_3(2V34)
ISPE_AQUAE
[Raw transfer]
2 PsiBlast_PDB 98.98100%-123 - C1 -3PYE 4.4 ISPE_MYCTU
1 PsiBlast_PDB 98.63100%-122 - C1 -3PYD - ISPE_MYCTU -
4 PsiBlast_PDB 98.16100%-122 - C1 -3PYG 3.9 ISPE_MYCTU
42 HHSearch 97.66100%-125 - C1 -3PYF 4.4 ISPE_MYCTU
3 PsiBlast_PDB 97.66100%-125 - C1 -3PYF 4.4 ISPE_MYCTU
5 PsiBlast_PDB 88.1076%-117 - C1 -4DXL 5.9 ?
7 PsiBlast_PDB 87.5276%-117 - C1 -4EMD 5.5 ?
6 PsiBlast_PDB 87.4176%-118 - C1 -4ED4 6.1 ?
14 PsiBlast_PDB 66.4930%-108 - C1 -2VF3 5.9 ISPE_AQUAE
9 PsiBlast_PDB 66.4130%-106 - C1 -2V2Q - ISPE_AQUAE -
12 PsiBlast_PDB 66.2930%-108 - C1 -2V34 4.7 ISPE_AQUAE
10 PsiBlast_PDB 65.9430%-105 - C1 -2V2V - ISPE_AQUAE -
11 PsiBlast_PDB 65.7130%-106 - C1 -2V2Z 8.5 ISPE_AQUAE
13 PsiBlast_PDB 65.0730%-107 - C1 -2V8P 5.3 ISPE_AQUAE
64 Fugue 64.6633%-112 - C1 -1UEK - ISPE_THET8 -
44 HHSearch 63.5734%-115 - C1 -1UEK - ISPE_THET8 -
45 HHSearch 62.2323% -89 - C1 -4RPF - KHSE_YERPN -
43 HHSearch 60.5928% -93 - C1 -2V8P - ISPE_AQUAE -
46 HHSearch 56.5727% -99 - C1 -2WW4 - ISPE_ECOLI -
8 PsiBlast_PDB 56.2638%-100 - C1 -1UEK - ISPE_THET8 -
16 PsiBlast_PDB 46.2537% -98 - C1 -1OJ4 5.6 ISPE_ECOL6
21 PsiBlast_CBE 46.2037%-101 - C1 -2WW4 4.4 ISPE_ECOLI
15 PsiBlast_PDB 46.1137% -98 - C1 -2WW4 4.5 ISPE_ECOLI