@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1017c: (2016-04-27 )
MSHDWTDNRKNLMLFAGRAHPELAEQVAKELDVHVTSQDAREFANGEIFVRFHESVRGCDAFVLQSCPAPVNRWLMEQLIMIDALKRGSAKRITAVMPFYPYARQDKKHRGREPISARLIADLLKTAGADRIVTVDLHTDQIQGFFDGPVDHMRGQNLLTGYIRDNYPDGNMVVVSPDSGRVRIAEKWADALGGVPLAFIHKTRDPRVPNQVVSNRVVGDVAGRTCVLIDDMIDTGGTIAGAVALLHNDGAGDVIIAATHGVLSDPAAQRLASCGAREVIVTNTLPIGEDKRFPQLTVLSIAPLLASTIRAVFENGSVTGLFDGDA

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMP_A_11(2HCR)
PRPS1_HUMAN
[Raw transfer]




AMP_B_12(2HCR)
PRPS1_HUMAN
[Raw transfer]




AMP_A_11(3DAH)
?
[Raw transfer]




AMP_B_13(3DAH)
?
[Raw transfer]




ABM_F_6(1DKU)
KPRS_BACSU
[Raw transfer]




ABM_E_5(1DKU)
KPRS_BACSU
[Raw transfer]




ABM_E_5(1DKU)
KPRS_BACSU
[Raw transfer]




AMP_B_12(3DAH)
?
[Raw transfer]




AMP_I_9(1U9Z)
KPRS_METJA
[Raw transfer]




AMP_L_12(1U9Z)
KPRS_METJA
[Raw transfer]




AMP_K_11(1U9Z)
KPRS_METJA
[Raw transfer]




AMP_J_10(1U9Z)
KPRS_METJA
[Raw transfer]




23 PsiBlast_CBE 97.9246%-151 - C3 -3DAH 4.0 ?
1 PsiBlast_PDB 94.8846%-152 - C3 -1DKU - KPRS_BACSU -
22 PsiBlast_CBE 94.8646%-150 - C3 -1DKR - KPRS_BACSU -
24 PsiBlast_CBE 94.6746%-150 - C3 -3DAH 3.0 ?
21 PsiBlast_CBE 94.6246%-155 - C3 -1DKU 3.3 KPRS_BACSU
2 PsiBlast_PDB 94.5046%-149 - C3 -3DAH - ? -
10 PsiBlast_PDB 93.3343%-151 - C3 -4LYG - PRPS1_HUMAN -
74 HHSearch 93.3045%-151 - C3 -1DKU 4.0 KPRS_BACSU
62 Fugue 93.2546%-147 - C3 -1DKU 4.0 KPRS_BACSU
31 PsiBlast_CBE 92.9343%-151 - C3 -4LYG - PRPS1_HUMAN -
75 HHSearch 92.8245%-145 - C3 -3DAH 3.0 ?
7 PsiBlast_PDB 92.7343%-149 - C3 -3EFH - PRPS1_HUMAN -
13 PsiBlast_PDB 92.3742%-151 - C3 -4LZO - PRPS1_HUMAN -
25 PsiBlast_CBE 92.3443%-147 - C3 -4LZN - PRPS1_HUMAN -
27 PsiBlast_CBE 92.2143%-146 - C3 -3EFH - PRPS1_HUMAN -
9 PsiBlast_PDB 91.8743%-150 - C3 -2H08 - PRPS1_HUMAN -
12 PsiBlast_PDB 91.8043%-146 - C3 -4M0P - PRPS1_HUMAN -
11 PsiBlast_PDB 91.6643%-148 - C3 -2H07 - PRPS1_HUMAN -
26 PsiBlast_CBE 91.4843%-147 - C3 -3S5J - PRPS1_HUMAN -
3 PsiBlast_PDB 91.3943%-144 - C3 -4S2U - ? -
28 PsiBlast_CBE 90.6143%-147 - C3 -2HCR 3.0 PRPS1_HUMAN
6 PsiBlast_PDB 90.4343%-146 - C3 -2HCR 3.4 PRPS1_HUMAN
19 PsiBlast_PDB 68.7131%-135 - C3 -1U9Z 3.3 KPRS_METJA
43 PsiBlast_CBE 68.1531%-134 - C3 -1U9Z 3.9 KPRS_METJA
44 PsiBlast_CBE 67.9331%-135 - C3 -1U9Z 4.0 KPRS_METJA
42 PsiBlast_CBE 67.5631%-135 - C3 -1U9Z 3.3 KPRS_METJA