@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1077: (2016-04-28 )
MRIAQHISELIGGTPLVRLNSVVPDGAGTVAAKVEYLNPGGSSKDRIAVKMIEAAEASGQLKPGGTIVEPTSGNTGVGLALVAQRRGYKCVFVCPDKVSEDKRNVLIAYGAEVVVCPTAVPPHDPASYYSVSDRLVRDIDGAWKPDQYANPEGPASHYVTTGPEIWADTEGKVTHFVAGIGTGGTITGAGRYLKEVSGGRVRIVGADPEGSVYSGGAGRPYLVEGVGEDFWPAAYDPSVPDEIIAVSDSDSFDMTRRLAREEAMLVGGSCGMAVVAALKVAEEAGPDALIVVLLPDGGRGYMSKIFNDAWMSSYGFLRSRLDGSTEQSTVGDVLRRKSGALPALVHTHPSETVRDAIGILREYGVSQMPVVGAEPPVMAGEVAGSVSERELLSAVFEGRAKLADAVSAHMSPPLRMIGAGELVSAAGKALRDWDALMVVEEGKPVGVITRYDLLGFLSEGAGRR

Atome Classification :

(59 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

KOU_A_3(3PC4)
?
[Raw transfer]




P1T_A_3(3PC3)
?
[Raw transfer]




P1T_A_3(3PC3)
?
[Raw transfer]




P1T_A_3(3PC3)
?
[Raw transfer]




PDA_A_2(2Q3D)
CYSK_MYCTU
[Raw transfer]




AA5_A_2(1Z7Y)
CYSK1_ARATH
[Raw transfer]




CYS_A_2(4LMB)
?
[Raw transfer]




PLP_D_4(1D6S)
CYSK_SALTY
[Raw transfer]




4AT_A_4(2EFY)
?
[Raw transfer]




PLP_E_5(1D6S)
CYSK_SALTY
[Raw transfer]




4AT_B_6(2EFY)
?
[Raw transfer]




PLP_B_5(4L0D)
CBS_HUMAN
[Raw transfer]




PLP_A_3(4L0D)
CBS_HUMAN
[Raw transfer]




PLP_A_3(1Z7W)
CYSK1_ARATH
[Raw transfer]




PLP_A_2(2ECO)
?
[Raw transfer]




FGA_B_11(4AIR)
?
[Raw transfer]




PLP_A_3(1VE1)
?
[Raw transfer]




PLP_A_5(4LMA)
?
[Raw transfer]




PLP_A_3(1OAS)
CYSK_SALTY
[Raw transfer]




PLP_A_5(4COO)
CBS_HUMAN
[Raw transfer]




PLP_A_2(5D84)
SBNA_STAAE
[Raw transfer]




PLP_A_4(4LMB)
?
[Raw transfer]




PLP_A_2(2ECQ)
?
[Raw transfer]




PLP_B_7(4LMA)
?
[Raw transfer]




PLP_A_3(2EFY)
?
[Raw transfer]




PLP_C_14(1FCJ)
CYSK_SALTY
[Raw transfer]




PLP_A_3(4AEC)
CYSKM_ARATH
[Raw transfer]




4MV_A_3(2ECO)
?
[Raw transfer]




PLP_B_5(2EFY)
?
[Raw transfer]




PLP_D_16(1FCJ)
CYSK_SALTY
[Raw transfer]




PLP_A_3(4AEC)
CYSKM_ARATH
[Raw transfer]




PLP_A_3(1VE1)
?
[Raw transfer]




PLP_B_18(4COO)
CBS_HUMAN
[Raw transfer]




PLP_A_3(1Z7W)
CYSK1_ARATH
[Raw transfer]




PLP_B_15(1FCJ)
CYSK_SALTY
[Raw transfer]




PLP_B_5(4AEC)
CYSKM_ARATH
[Raw transfer]




PLP_A_3(1OAS)
CYSK_SALTY
[Raw transfer]




PLP_B_4(1OAS)
CYSK_SALTY
[Raw transfer]




PLP_A_4(4LMB)
?
[Raw transfer]




PLP_A_5(4COO)
CBS_HUMAN
[Raw transfer]




PLP_A_13(1FCJ)
CYSK_SALTY
[Raw transfer]




PLP_A_2(3ZEI)
CYSK_MYCTU
[Raw transfer]




CYS_B_11(3BM5)
?
[Raw transfer]




PLP_B_7(4PCU)
CBS_HUMAN
[Raw transfer]




PLP_A_3(3PC2)
?
[Raw transfer]




PLP_A_4(4PCU)
CBS_HUMAN
[Raw transfer]




PLP_D_11(2BHS)
CYSM_ECOLI
[Raw transfer]




PLP_B_8(2BHS)
CYSM_ECOLI
[Raw transfer]




PLP_A_7(2BHS)
CYSM_ECOLI
[Raw transfer]




PLP_C_9(2BHS)
CYSM_ECOLI
[Raw transfer]




PLP_A_4(3DWG)
CYSM_MYCTU
[Raw transfer]




MPD_A_6(2Q3B)
CYSK_MYCTU
[Raw transfer]




FGA_B_10(4AIR)
?
[Raw transfer]




CYS_A_3(4LMB)
?
[Raw transfer]




MPD_A_6(2Q3B)
CYSK_MYCTU
[Raw transfer]




OAS_B_3(5HBG)
CYSM_HELPY
[Raw transfer]




3HL_A_3(2ECQ)
?
[Raw transfer]




CHAIN_B_3(2ISQ)
CYSK1_ARATH
[Raw transfer]

-

101 HHSearch 91.9439% -73 - C2 -4COO 4.5 CBS_HUMAN
102 HHSearch 90.4536% -69 - C2 -3PC3 8.4 ?
122 Fugue 89.4635% -64 - C2 -3PC3 8.4 ?
2 PsiBlast_PDB 89.3939% -70 - C2 -4COO 4.5 CBS_HUMAN
3 PsiBlast_PDB 89.2739% -72 - C2 -4L0D 3.8 CBS_HUMAN
24 PsiBlast_CBE 88.9239% -71 - C2 -4L0D 3.6 CBS_HUMAN
26 PsiBlast_CBE 88.8139% -71 - C2 -4L3V - CBS_HUMAN -
23 PsiBlast_CBE 88.6939% -71 - C2 -4COO 4.4 CBS_HUMAN
4 PsiBlast_PDB 88.6839% -71 - C2 -4L28 - CBS_HUMAN -
5 PsiBlast_PDB 88.5839% -72 - C2 -4L3V - CBS_HUMAN -
21 PsiBlast_CBE 88.2239% -72 - C2 -4PCU 3.4 CBS_HUMAN
25 PsiBlast_CBE 88.1639% -70 - C2 -4L3V - CBS_HUMAN -
22 PsiBlast_CBE 87.3639% -70 - C2 -4L27 - CBS_HUMAN -
10 PsiBlast_PDB 86.0735% -62 - C2 -3PC3 8.4 ?
9 PsiBlast_PDB 85.4935% -66 - C2 -3PC2 4.0 ?
11 PsiBlast_PDB 85.4635% -63 - C2 -3PC4 6.0 ?
1 PsiBlast_PDB 85.2239% -68 - C2 -4PCU 3.0 CBS_HUMAN
29 PsiBlast_CBE 76.5944% -71 - C2 -1M54 - CBS_HUMAN -
8 PsiBlast_PDB 76.1444% -70 - C2 -1JBQ - CBS_HUMAN -
35 PsiBlast_CBE 75.6744% -69 - C2 -1JBQ - CBS_HUMAN -
44 PsiBlast_CBE 73.5445% -72 - C2 -2EFY 4.6 ?
20 PsiBlast_PDB 73.4843% -73 - C2 -2ISQ 5.4 CYSK1_ARATH
43 PsiBlast_CBE 72.9045% -68 - C2 -2EFY 3.2 ?
47 PsiBlast_CBE 72.3345% -70 - C2 -1VE1 3.7 ?
14 PsiBlast_PDB 72.1146% -68 - C2 -3ZEI 4.7 CYSK_MYCTU
46 PsiBlast_CBE 72.0445% -72 - C2 -2ECO 4.7 ?
16 PsiBlast_PDB 71.4946% -67 - C2 -2Q3B 3.0 CYSK_MYCTU
19 PsiBlast_PDB 71.3243% -70 - C2 -1Z7W 4.4 CYSK1_ARATH
51 PsiBlast_CBE 71.2838% -73 - C2 -2BHS 3.5 CYSM_ECOLI
41 PsiBlast_CBE 71.1342% -69 - C2 -4AEC 4.1 CYSKM_ARATH
77 PsiBlast_CBE 71.1238% -67 - C2 -1FCJ 3.7 CYSK_SALTY
45 PsiBlast_CBE 71.0245% -69 - C2 -2ECQ 4.0 ?
40 PsiBlast_CBE 70.9743% -69 - C2 -1Z7Y 2.9 CYSK1_ARATH
48 PsiBlast_CBE 70.7438% -70 - C2 -2BHS 3.6 CYSM_ECOLI
108 HHSearch 70.7345% -67 - C2 -2Q3B 3.0 CYSK_MYCTU
121 HHSearch 70.6844% -63 - C2 -1VE1 3.7 ?
49 PsiBlast_CBE 70.5238% -71 - C2 -2BHS 3.5 CYSM_ECOLI
109 HHSearch 70.4642% -69 - C2 -1Z7W 4.4 CYSK1_ARATH
79 PsiBlast_CBE 70.2938% -66 - C2 -1FCJ 3.4 CYSK_SALTY
15 PsiBlast_PDB 70.1546% -60 - C2 -2Q3D 8.1 CYSK_MYCTU
75 PsiBlast_CBE 70.0138% -69 - C2 -1OAS 3.7 CYSK_SALTY
64 PsiBlast_CBE 69.9140% -64 - C2 -4LMA 4.1 ?
80 PsiBlast_CBE 69.8538% -65 - C2 -1FCJ 3.6 CYSK_SALTY
63 PsiBlast_CBE 69.3940% -63 - C2 -4LMA 4.4 ?
78 PsiBlast_CBE 69.3238% -63 - C2 -1FCJ 3.0 CYSK_SALTY
90 PsiBlast_CBE 69.2238% -62 - C2 -1D6S 5.0 CYSK_SALTY
76 PsiBlast_CBE 69.2238% -68 - C2 -1OAS 4.0 CYSK_SALTY
106 HHSearch 69.1641% -67 * C2 *4AEC 4.6 CYSKM_ARATH
123 Fugue 69.1240% -62 - C2 -1OAS 4.0 CYSK_SALTY
42 PsiBlast_CBE 68.5842% -69 - C2 -4AEC 4.6 CYSKM_ARATH
50 PsiBlast_CBE 68.5438% -69 - C2 -2BHS 3.5 CYSM_ECOLI
62 PsiBlast_CBE 68.5340% -53 - C2 -4LMB 4.1 ?
93 PsiBlast_CBE 68.2237% -78 - C2 -4AIR 2.4 ?
89 PsiBlast_CBE 67.8038% -62 - C2 -1D6S 4.8 CYSK_SALTY
118 HHSearch 67.7939% -56 - C2 -4LMB 4.1 ?
110 HHSearch 66.5232% -64 - C2 -5D84 3.6 SBNA_STAAE
115 HHSearch 66.2037% -59 - C2 -3DWG 3.7 CYSM_MYCTU
96 PsiBlast_CBE 63.2534% -55 - C2 -3BM5 2.7 ?
52 PsiBlast_CBE 40.3637% -9 - C2 -5HBG 1.3 CYSM_HELPY