@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1079: (2016-04-28 )
MSEDRTGHQGISGPATRAIHAGYRPDPATGAVNVPIYASSTFAQDGVGGLRGGFEYARTGNPTRAALEASLAAVEEGAFARAFSSGMAATDCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTRWDVQYTPVRLADLDAVGAAITPRTRLIWVETPTNPLLSIADITAIAELGTDRSAKVLVDNTFASPALQQPLRLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDEEFAFLQNGAGAVPGPFDAYLTMRGLKTLVLRMQRHSENACAVAEFLADHPSVSSVLYPGLPSHPGHEIAARQMRGFGGMVSVRMRAGRRAAQDLCAKTRVFILAESLGGVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDIADLLGDLEQALG

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLG_A_2(4HF8)
?
[Raw transfer]



PPJ_A_3(1E5E)
?
[Raw transfer]



PPJ_A_3(1E5E)
?
[Raw transfer]



LCS_A_2(4OMA)
?
[Raw transfer]



PLP_A_3(1E5F)
?
[Raw transfer]



PPJ_B_7(1E5E)
?
[Raw transfer]



PLP_B_8(1E5F)
?
[Raw transfer]



PZP_A_2(3MKJ)
?
[Raw transfer]



PLP_A_3(5DX5)
?
[Raw transfer]



PLP_A_3(5DX5)
?
[Raw transfer]



PLP_B_5(5DX5)
?
[Raw transfer]



PLP_A_11(1IBJ)
METC_ARATH
[Raw transfer]



PLP_A_3(2CTZ)
?
[Raw transfer]



PLP_A_11(1IBJ)
METC_ARATH
[Raw transfer]



NLE_A_2(3JWB)
?
[Raw transfer]



PLP_C_13(1IBJ)
METC_ARATH
[Raw transfer]



MPJ_A_2(3JWA)
?
[Raw transfer]



ECX_A_2(3JW9)
?
[Raw transfer]
22 PsiBlast_CBE 96.4686%-100 - C1 -3QI6 - ? -
2 PsiBlast_PDB 95.6486%-100 - C1 -3QI6 - ? -
1 PsiBlast_PDB 95.6386% -98 - C1 -3QHX - ? -
23 PsiBlast_CBE 95.0886% -99 - C1 -3QHX - ? -
21 PsiBlast_CBE 94.6786%-105 - C1 -3QI6 - ? -
24 PsiBlast_CBE 94.4586%-101 - C1 -3QHX - ? -
109 HHSearch 93.1685% -97 - C1 -3QHX - ? -
4 PsiBlast_PDB 81.9656% -93 - C1 -4IYO - ? -
3 PsiBlast_PDB 81.7256% -94 - C1 -4IY7 - ? -
25 PsiBlast_CBE 81.5656% -93 - C1 -4IY7 - ? -
26 PsiBlast_CBE 81.3656% -94 - C1 -4IY7 - ? -
27 PsiBlast_CBE 81.0756% -92 - C1 -4IY7 - ? -
103 HHSearch 80.5655% -90 - C1 -4IY7 - ? -
11 PsiBlast_PDB 79.0142% -91 - C1 -4OMA 6.2 ?
113 HHSearch 78.9042% -96 - C1 -2RFV - ? -
13 PsiBlast_PDB 78.7241% -89 - C1 -3JWA 2.2 ?
16 PsiBlast_PDB 78.6341% -92 - C1 -2RFV - ? -
102 HHSearch 78.5947% -94 - C1 -3COG - CGL_HUMAN -
5 PsiBlast_PDB 78.4956% -95 - C1 -3E6G - ? -
14 PsiBlast_PDB 77.6541% -90 - C1 -3JWB 2.0 ?
12 PsiBlast_PDB 77.5442% -90 - C1 -4HF8 5.9 ?
15 PsiBlast_PDB 76.8841% -89 - C1 -3JW9 3.4 ?
43 PsiBlast_CBE 76.5642% -89 - C1 -5DX5 3.4 ?
105 HHSearch 75.2842% -86 - C1 -5DX5 4.1 ?
17 PsiBlast_PDB 74.9942% -89 - C1 -5DX5 4.1 ?
10 PsiBlast_PDB 74.6542% -91 - C1 -3MKJ 4.7 ?
70 PsiBlast_CBE 74.2739% -91 - C1 -1E5F 3.6 ?
107 HHSearch 73.6240% -88 - C1 -1E5E 5.5 ?
72 PsiBlast_CBE 73.5939% -91 - C1 -1E5E 5.0 ?
71 PsiBlast_CBE 72.4139% -90 - C1 -1E5F 3.8 ?
73 PsiBlast_CBE 72.2739% -89 - C1 -1E5E 5.5 ?
106 HHSearch 72.2442% -89 - C1 -1IBJ 4.0 METC_ARATH
20 PsiBlast_PDB 69.6143% -92 - C1 -1IBJ 4.0 METC_ARATH
44 PsiBlast_CBE 67.2743% -88 - C1 -1IBJ 3.5 METC_ARATH
114 HHSearch 61.3034% -84 - C1 -2CTZ 4.6 ?