@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1093: (2016-04-28 )
MSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEFANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGGRSGLIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALATGSSVDVSALKDRATRLARAFPLYDGLEEWSLVGR

Atome Classification :

(70 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2BO_A_3(4WXG)
GLYA_STRT1
[Raw transfer]



2BO_A_3(4WXG)
GLYA_STRT1
[Raw transfer]



2BO_C_6(4WXG)
GLYA_STRT1
[Raw transfer]



PLG_A_3(4WXF)
GLYA_STRT1
[Raw transfer]



PLG_C_6(4WXF)
GLYA_STRT1
[Raw transfer]



FON_H_8(1KL2)
?
[Raw transfer]



ALO_A_3(2W7G)
?
[Raw transfer]



PLG_A_4(1RVY)
GLYC_RABIT
[Raw transfer]



GLY_A_2(2VMZ)
?
[Raw transfer]



GLY_A_2(2VMS)
?
[Raw transfer]



GOL_B_5(4PVF)
GLYM_HUMAN
[Raw transfer]



GOL_A_3(4PVF)
GLYM_HUMAN
[Raw transfer]



PLP_A_3(2W7K)
?
[Raw transfer]



PLP_A_3(2VIB)
?
[Raw transfer]



ALO_A_3(2VMX)
?
[Raw transfer]



PLP_C_3(1YJS)
?
[Raw transfer]



PLP_A_2(2W7L)
?
[Raw transfer]



PLP_A_3(2VMO)
?
[Raw transfer]



PLP_A_3(2W7M)
?
[Raw transfer]



PLP_A_3(2VMT)
?
[Raw transfer]



PLP_A_2(2W7G)
?
[Raw transfer]



PLP_A_3(2VMW)
?
[Raw transfer]



PLP_A_3(2VGV)
?
[Raw transfer]



PLP_A_3(2VGU)
?
[Raw transfer]



PLP_A_3(2W7J)
?
[Raw transfer]



PLP_B_9(1RVU)
GLYC_RABIT
[Raw transfer]



PLP_A_3(2VMU)
?
[Raw transfer]



PLP_A_2(2VMX)
?
[Raw transfer]



PLP_B_4(1CJ0)
GLYC_RABIT
[Raw transfer]



PLP_A_9(1RV4)
GLYC_RABIT
[Raw transfer]



PLP_A_3(2VMP)
?
[Raw transfer]



PLP_A_6(1RV3)
GLYC_RABIT
[Raw transfer]



PLP_A_3(2VMQ)
?
[Raw transfer]



PLP_A_3(2VI9)
?
[Raw transfer]



PLP_A_3(2VGT)
?
[Raw transfer]



PLP_C_3(1KL1)
?
[Raw transfer]



PLP_C_3(1KKP)
?
[Raw transfer]



PLP_A_6(1RV3)
GLYC_RABIT
[Raw transfer]



PLP_A_3(2VIA)
?
[Raw transfer]



PLP_C_3(1YJZ)
?
[Raw transfer]



PLP_A_5(2DKJ)
GLYA_THET8
[Raw transfer]



PLP_A_3(2VMS)
?
[Raw transfer]



PLP_A_3(2VMZ)
?
[Raw transfer]



PLP_A_3(2W7H)
?
[Raw transfer]



PLP_A_7(1RVU)
GLYC_RABIT
[Raw transfer]



PLP_A_3(1KKJ)
?
[Raw transfer]



PLP_A_2(2VI8)
?
[Raw transfer]



PLP_A_2(2VMR)
?
[Raw transfer]



PLP_A_2(2VMN)
?
[Raw transfer]



PLP_A_2(2W7D)
?
[Raw transfer]



PLP_A_2(2VI8)
?
[Raw transfer]



PLP_A_3(2W7E)
?
[Raw transfer]



PLP_A_2(2VMV)
?
[Raw transfer]



PLP_A_2(2VGS)
?
[Raw transfer]



PLP_A_3(2W7F)
?
[Raw transfer]



PLP_A_3(1CJ0)
GLYC_RABIT
[Raw transfer]



PLP_B_6(2DKJ)
GLYA_THET8
[Raw transfer]



PLP_B_11(1RV4)
GLYC_RABIT
[Raw transfer]



PLP_B_5(1RVY)
GLYC_RABIT
[Raw transfer]



PLP_B_7(1RV3)
GLYC_RABIT
[Raw transfer]



PLP_A_2(2W7I)
?
[Raw transfer]



PLP_A_5(2DKJ)
GLYA_THET8
[Raw transfer]



PLP_A_2(1BJ4)
GLYC_HUMAN
[Raw transfer]



PLP_A_2(1BJ4)
GLYC_HUMAN
[Raw transfer]



FFO_B_8(2VMY)
?
[Raw transfer]



FON_G_7(1KL2)
?
[Raw transfer]



FFO_A_6(2VMY)
?
[Raw transfer]



PLP_A_3(2VGW)
?
[Raw transfer]



PLP_C_3(1YJY)
?
[Raw transfer]



PLP_A_2(3G8M)
GLYA_ECOLI
[Raw transfer]
26 PsiBlast_CBE 81.6158% -89 - C1 -2VMY 4.0 ?
48 PsiBlast_CBE 81.2954% -93 - C1 -3PGY - GLYA_STAAC -
17 PsiBlast_PDB 81.2557% -90 - C1 -2W7D 4.3 ?
24 PsiBlast_CBE 80.9558% -89 - C1 -2VMZ 4.2 ?
9 PsiBlast_PDB 80.7557% -89 - C1 -2VIB 3.4 ?
8 PsiBlast_PDB 80.7357% -90 - C1 -2VI8 4.2 ?
29 PsiBlast_CBE 80.7158% -89 - C1 -2VMV 4.1 ?
12 PsiBlast_PDB 80.6657% -89 - C1 -2VGS 4.1 ?
16 PsiBlast_PDB 80.5757% -88 - C1 -2VGU 4.1 ?
27 PsiBlast_CBE 80.5258% -89 - C1 -2VMX 3.8 ?
42 PsiBlast_CBE 80.4957% -89 - C1 -2VMT 4.1 ?
43 PsiBlast_CBE 80.4757% -87 - C1 -2VMS 4.0 ?
18 PsiBlast_PDB 80.4457% -88 - C1 -2W7E 4.3 ?
44 PsiBlast_CBE 80.4257% -89 - C1 -2VMR 4.2 ?
2 PsiBlast_PDB 80.3860% -88 - C1 -2DKJ 3.0 GLYA_THET8
46 PsiBlast_CBE 80.3154% -96 - C1 -3PGY - GLYA_STAAC -
33 PsiBlast_CBE 80.2957% -88 - C1 -2VMP 3.9 ?
25 PsiBlast_CBE 80.2958% -88 - C1 -2VMY 4.3 ?
59 PsiBlast_CBE 80.2552% -91 - C1 -4OT8 - ? -
47 PsiBlast_CBE 80.2354% -94 - C1 -3PGY - GLYA_STAAC -
41 PsiBlast_CBE 80.2057% -87 - C1 -2VMU 3.9 ?
19 PsiBlast_PDB 80.1757% -88 - C1 -2W7F 3.3 ?
13 PsiBlast_PDB 80.0657% -89 - C1 -2VGT 3.7 ?
32 PsiBlast_CBE 80.0557% -87 - C1 -2VMQ 4.0 ?
6 PsiBlast_PDB 79.9957% -90 - C1 -1KL2 5.6 ?
10 PsiBlast_PDB 79.9857% -89 - C1 -2VIA 3.7 ?
23 PsiBlast_CBE 79.9457% -89 - C1 -2W7H 4.1 ?
28 PsiBlast_CBE 79.8458% -88 - C1 -2VMW 4.1 ?
34 PsiBlast_CBE 79.7857% -87 - C1 -2VMO 3.5 ?
75 PsiBlast_CBE 79.7252% -91 - C1 -4WXG 6.2 GLYA_STRT1
35 PsiBlast_CBE 79.6857% -88 - C1 -2VMN 4.3 ?
21 PsiBlast_CBE 79.6660% -88 - C1 -2DKJ 4.5 GLYA_THET8
15 PsiBlast_PDB 79.6457% -87 - C1 -2VGW 4.0 ?
14 PsiBlast_PDB 79.5857% -89 - C1 -2VGV 4.0 ?
7 PsiBlast_PDB 79.3257% -89 - C1 -1YJS 4.2 ?
36 PsiBlast_CBE 79.3157% -89 - C1 -2W7M 4.0 ?
11 PsiBlast_PDB 79.2357% -87 - C1 -2VI9 3.6 ?
117 HHSearch 79.0859% -88 - C1 -2DKJ 4.3 GLYA_THET8
20 PsiBlast_PDB 79.0857% -88 - C1 -2W7G 3.4 ?
39 PsiBlast_CBE 79.0557% -88 - C1 -2W7J 4.0 ?
38 PsiBlast_CBE 78.9757% -88 - C1 -2W7K 3.7 ?
40 PsiBlast_CBE 78.9057% -88 - C1 -2W7I 4.2 ?
77 PsiBlast_CBE 78.8652% -88 - C1 -4WXF 5.1 GLYA_STRT1
37 PsiBlast_CBE 78.8457% -88 - C1 -2W7L 4.1 ?
76 PsiBlast_CBE 78.3652% -89 - C1 -4WXG 5.7 GLYA_STRT1
4 PsiBlast_PDB 78.3357% -88 - C1 -1KKP 4.2 ?
30 PsiBlast_CBE 78.3057% -91 - C1 -1YJZ 3.8 ?
3 PsiBlast_PDB 78.2757% -90 - C1 -1KKJ 3.0 ?
115 HHSearch 78.1052% -89 - C1 -4WXG 5.7 GLYA_STRT1
5 PsiBlast_PDB 78.0857% -89 - C1 -1KL1 4.1 ?
31 PsiBlast_CBE 78.0457% -91 - C1 -1YJY 4.1 ?
78 PsiBlast_CBE 78.0152% -89 - C1 -4WXF 5.6 GLYA_STRT1
22 PsiBlast_CBE 77.9457% -88 - C1 -1KL2 4.3 ?
119 HHSearch 77.1558% -89 * C1 *2VI8 4.2 ?
83 PsiBlast_CBE 76.2645% -92 - C1 -4PVF 3.3 GLYM_HUMAN
84 PsiBlast_CBE 76.0145% -88 - C1 -4PVF 3.0 GLYM_HUMAN
70 PsiBlast_CBE 75.4053% -90 - C1 -3G8M 4.3 GLYA_ECOLI
111 HHSearch 75.0148% -87 - C1 -1RV3 3.5 GLYC_RABIT
88 PsiBlast_CBE 72.7546% -89 - C1 -1CJ0 4.6 GLYC_RABIT
92 PsiBlast_CBE 70.8246% -88 - C1 -1RVU 3.2 GLYC_RABIT
91 PsiBlast_CBE 70.6046% -88 - C1 -1RVY 3.0 GLYC_RABIT
95 PsiBlast_CBE 70.3346% -86 - C1 -1RV4 3.4 GLYC_RABIT
90 PsiBlast_CBE 70.0746% -87 - C1 -1RVY 3.6 GLYC_RABIT
97 PsiBlast_CBE 70.0446% -87 - C1 -1RV3 3.5 GLYC_RABIT
89 PsiBlast_CBE 69.9746% -88 - C1 -1CJ0 3.9 GLYC_RABIT
102 Fugue 69.7744% -84 - C1 -1BJ4 2.4 GLYC_HUMAN
93 PsiBlast_CBE 69.6346% -87 - C1 -1RVU 3.2 GLYC_RABIT
94 PsiBlast_CBE 69.3746% -85 - C1 -1RV4 3.6 GLYC_RABIT
96 PsiBlast_CBE 69.3146% -87 - C1 -1RV3 3.4 GLYC_RABIT
98 PsiBlast_CBE 68.4545% -81 - C1 -1BJ4 2.4 GLYC_HUMAN