@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1131: (2016-04-28 )
MTGPLAAARSVAATKSMTAPTVDERPDIKKGLAGVVVDTTAISKVVPQTNSLTYRGYPVQDLAARCSFEQVAFLLWRGELPTDAELALFSQRERASRRVDRSMLSLLAKLPDNCHPMDVVRTAISYLGAEDPDEDDAAANRAKAMRMMAVLPTIVAIDMRRRRGLPPIAPHSGLGYAQNFLHMCFGEVPETAVVSAFEQSMILYAEHGFNASTFAARVVTSTQSDIYSAVTGAIGALKGRLHGGANEAVMHDMIEIGDPANAREWLRAKLARKEKIMGFGHRVYRHGDSRVPTMKRALERVGTVRDGQRWLDIYQVLAAEMASATGILPNLDFPTGPAYYLMGFDIASFTPIFVMSRITGWTAHIMEQATANALIRPLSAYCGHEQRVLPGTF

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_C_3(1A59)
PRPC_ABDS2
[Raw transfer]




COA_C_3(1A59)
PRPC_ABDS2
[Raw transfer]




COA_D_4(1AJ8)
CISY_PYRFU
[Raw transfer]




COA_C_3(1AJ8)
CISY_PYRFU
[Raw transfer]




COA_C_3(1AJ8)
CISY_PYRFU
[Raw transfer]




CIT_E_5(1A59)
PRPC_ABDS2
[Raw transfer]




CIT_F_6(1AJ8)
CISY_PYRFU
[Raw transfer]




GOL_D_4(1VGM)
?
[Raw transfer]




GOL_A_4(1IOM)
?
[Raw transfer]




GOL_D_4(1VGM)
?
[Raw transfer]




GOL_A_4(1IOM)
?
[Raw transfer]




FLC_A_3(2P2W)
?
[Raw transfer]




FLC_A_3(2P2W)
?
[Raw transfer]




48 HHSearch 99.60100%-105 - C7 -3HWK - PRPC_MYCTU -
1 PsiBlast_PDB 99.60100%-105 - C7 -3HWK - PRPC_MYCTU -
22 PsiBlast_CBE 98.37100%-106 - C7 -3HWK - PRPC_MYCTU -
21 PsiBlast_CBE 98.21100%-106 - C7 -3HWK - PRPC_MYCTU -
23 PsiBlast_CBE 98.13100%-108 - C7 -3HWK - PRPC_MYCTU -
26 PsiBlast_CBE 98.11100%-107 - C7 -3HWK - PRPC_MYCTU -
24 PsiBlast_CBE 97.66100%-105 - C7 -3HWK - PRPC_MYCTU -
27 PsiBlast_CBE 97.59100%-108 - C7 -3HWK - PRPC_MYCTU -
25 PsiBlast_CBE 97.28100%-109 - C7 -3HWK - PRPC_MYCTU -
60 HHSearch 86.9559% -96 - C7 -1A59 7.4 PRPC_ABDS2
2 PsiBlast_PDB 85.7758% -94 - C7 -1A59 7.4 PRPC_ABDS2
31 PsiBlast_CBE 80.6940% -93 - C7 -1AJ8 7.8 CISY_PYRFU
51 HHSearch 80.4640% -93 * C7 *1AJ8 7.1 CISY_PYRFU
35 PsiBlast_CBE 80.2337%-104 - C7 -2IBP - ? -
10 PsiBlast_PDB 80.1937%-106 - C7 -2IBP - ? -
6 PsiBlast_PDB 80.1540% -92 - C7 -1AJ8 7.2 CISY_PYRFU
63 HHSearch 80.0738% -99 - C7 -2IBP - ? -
37 PsiBlast_CBE 80.0037% -94 - C7 -3O8J - PRPC_SALTY -
50 HHSearch 79.8441% -93 - C7 -1IOM 3.1 ?
42 PsiBlast_CBE 79.0837% -99 - C7 -3O8J - PRPC_SALTY -
62 HHSearch 77.8334% -92 - C7 -1VGM 2.3 ?
3 PsiBlast_PDB 77.5341% -90 - C7 -1IOM 3.1 ?
13 PsiBlast_PDB 77.2034% -92 - C7 -1VGM 2.3 ?
58 HHSearch 77.1539% -99 - C7 -2P2W 3.8 ?
7 PsiBlast_PDB 76.5839% -97 - C7 -2P2W 3.8 ?