@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1188: (2016-04-29 )
MAGWFAHTLRPAMLAAGRSDRLGRIVERSPLTRGVVRRFVPGDTLDDVVDIVTALRDSGRYLSIDYLGENVTDADDAAAAVRAYLGLLDVLGRRGDIACDGVRPLEVSLKLSALGQALDRDGQKIALDNARAICERAERVGAWVTVDAEDHTTTDSTLSISGDLRVDFPWLGTVVQAYLRRTLADCAELAAVGARVRLCKGAYDEPASVAYRDAAQVTDSYLRCLRVLTAGRGYPMVATHDPVIIAAVPGITRESGRSQGDFEYQMLYGVRDDEQRRLTGAGNHVRVYVPFGTRWYGYFLRRLAERPANLAFFLRALTDRRRARGCAER

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FDA_A_3(4H6R)
?
[Raw transfer]



FAD_C_3(2G37)
?
[Raw transfer]



FAD_D_4(2G37)
?
[Raw transfer]



FDA_C_4(4H6R)
?
[Raw transfer]



FAD_A_3(4H6Q)
?
[Raw transfer]



FAD_A_3(4H6Q)
?
[Raw transfer]



FAD_C_6(4H6Q)
?
[Raw transfer]



HYP_A_3(3E2Q)
PUTA_ECOLI
[Raw transfer]
23 PsiBlast_CBE 94.9439%-103 * C6 *2G37 11.4 ?
3 PsiBlast_PDB 94.4139%-104 - C6 -2G37 11.7 ?
26 HHSearch 91.5627% -91 - C6 -3E2Q 3.5 PUTA_ECOLI
7 PsiBlast_PDB 90.1327% -94 - C6 -4NMD - ? -
22 PsiBlast_CBE 90.0639% -92 - C6 -4H6Q 12.5 ?
6 PsiBlast_PDB 89.9127% -91 - C6 -4NMB - ? -
1 PsiBlast_PDB 89.7439% -94 - C6 -4H6Q 12.5 ?
2 PsiBlast_PDB 89.6639% -94 - C6 -4H6R 12.3 ?
25 HHSearch 89.1836% -98 - C6 -4H6Q 12.5 ?
5 PsiBlast_PDB 89.0627% -89 - C6 -4NMA - ? -
4 PsiBlast_PDB 88.9427% -90 - C6 -4NM9 - ? -
8 PsiBlast_PDB 88.8527%-100 - C6 -4NME - ? -
21 PsiBlast_CBE 88.8039% -94 - C6 -4H6R 12.4 ?
10 PsiBlast_PDB 86.8127% -95 - C6 -4JNY - PUTA_ECOLI -
9 PsiBlast_PDB 85.7727% -94 - C6 -4JNZ - PUTA_ECOLI -
29 HHSearch 82.1626% -81 - C6 -3HAZ - ? -
49 Fugue 80.6930% -73 - C6 -4Q71 - ? -
50 Fugue 58.2820% -55 - C3 -4M59 - ? -
51 Fugue 51.2518% -37 - C4 -4TXA - RC3H1_MOUSE -
52 Fugue 47.5511% -50 - C6 -1YX1 - ? -