@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1208: (2016-04-29 )
MTASELVAGDLAGGRAPGALPLDTTWHRPGWTIGELEAAKAGRTISVVLPALNEEATIESVIDSISPLVDGLVDELIVLDSGSTDDTEIRAIASGARVVSREQALPEVPVRPGKGEALWRSLAATSGDIVVFIDSDLINPHPLFVPWLVGPLLTGEGIQLVKSFYRRPLQVSDVTSGVCATGGGRVTELVARPLLAALRPELGCVLQPLSGEYAASRELLTSLPFAPGYGVEIGLLIDTFDRLGLDAIAQVNLGVRAHRNRPLDELGAMSRQVIATLLSRCGIPDSGVGLTQFLPGGPDDSDYTRHTWPVSLVDRPPMKVMRPR

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UDP_A_2(4DEC)
GPGS_MYCTU
[Raw transfer]



UPG_A_4(4Y6N)
GPGS_MYCTU
[Raw transfer]



UPG_A_4(3CKQ)
GPGS_MYCPA
[Raw transfer]



UPG_A_4(4Y7F)
GPGS_MYCTU
[Raw transfer]



UPG_A_4(4Y7G)
GPGS_MYCTU
[Raw transfer]



UPG_A_5(4Y9X)
GPGS_MYCTU
[Raw transfer]



UDP_A_3(3CKO)
GPGS_MYCPA
[Raw transfer]



UDP_A_4(3CKN)
GPGS_MYCPA
[Raw transfer]



GDP_B_8(3O3P)
?
[Raw transfer]



UDP_A_3(3CKV)
GPGS_MYCPA
[Raw transfer]



GDD_A_7(3O3P)
?
[Raw transfer]



UDP_A_3(3E25)
GPGS_MYCTU
[Raw transfer]



5GP_A_3(3KIA)
?
[Raw transfer]



UDP_A_2(4DE7)
GPGS_MYCTU
[Raw transfer]



GOL_A_3(4DDZ)
GPGS_MYCTU
[Raw transfer]



5GP_C_8(3KIA)
?
[Raw transfer]



GOL_A_4(3CKO)
GPGS_MYCPA
[Raw transfer]



CIT_A_3(3CKJ)
GPGS_MYCPA
[Raw transfer]



CIT_A_3(3CKJ)
GPGS_MYCPA
[Raw transfer]



CIT_A_3(3CKJ)
GPGS_MYCPA
[Raw transfer]
10 PsiBlast_PDB 97.45100%-119 - C4 -4DEC 6.4 GPGS_MYCTU
7 PsiBlast_PDB 96.75100%-122 - C4 -4Y9X 8.3 GPGS_MYCTU
5 PsiBlast_PDB 96.72100%-118 - C4 -4Y7F 9.4 GPGS_MYCTU
9 PsiBlast_PDB 96.50100%-115 - C4 -4DE7 4.1 GPGS_MYCTU
3 PsiBlast_PDB 96.38100%-119 - C4 -4Y6N 8.7 GPGS_MYCTU
6 PsiBlast_PDB 95.77100%-118 - C4 -4Y7G 9.0 GPGS_MYCTU
49 Fugue 95.7384%-118 - C4 -3CKJ 3.8 GPGS_MYCPA
2 PsiBlast_PDB 95.44100%-122 - C4 -3E26 - GPGS_MYCTU -
8 PsiBlast_PDB 95.27100%-117 - C4 -4DDZ 2.9 GPGS_MYCTU
11 PsiBlast_PDB 94.5882%-117 - C4 -3CKJ 3.8 GPGS_MYCPA
12 PsiBlast_PDB 94.5082%-114 - C4 -3CKN 5.3 GPGS_MYCPA
1 PsiBlast_PDB 94.43100%-120 - C4 -3E25 4.1 GPGS_MYCTU
24 HHSearch 94.3183%-120 - C4 -3CKJ 3.8 GPGS_MYCPA
14 PsiBlast_PDB 94.2282%-116 - C4 -3CKQ 4.9 GPGS_MYCPA
13 PsiBlast_PDB 93.9882%-117 - C4 -3CKO 6.6 GPGS_MYCPA
15 PsiBlast_PDB 93.9182%-114 - C4 -3CKV 5.2 GPGS_MYCPA
4 PsiBlast_PDB 87.84100%-105 - C- -4Y6U - GPGS_MYCTU -
16 PsiBlast_PDB 75.8537%-105 - C4 -3F1Y - ? -
21 PsiBlast_CBE 75.8037%-104 - C4 -3O3P 5.9 ?
23 PsiBlast_CBE 74.4337%-101 - C4 -3F1Y - ? -
18 PsiBlast_PDB 74.0737%-104 - C4 -3O3P 5.2 ?
17 PsiBlast_PDB 73.8137%-103 - C4 -3KIA 6.1 ?
22 PsiBlast_CBE 73.2237%-102 - C4 -3KIA 6.5 ?