@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1253: (2016-04-29 )
MAFPEYSPAASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVARKMDALTRVLEVEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIEKATRQTLTEAQLPTVEDVNTQRVAKFADSITNALGGPGIELFRRLVEEYEREHDVPMADIAAALAVQCRGGEAFLMAPDPPLSRRNRDQRRDRPQRPKRRPDLTTYRVAVGKRHKIGPGAIVGAIANEGGLHRSDFGQIRIGPDFSLVELPAKLPRATLKKLAQTRISGVLIDLRPYRPPDAARRHNGGKPRRKHVG

Atome Classification :

(68 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_7(3FHT)
DD19B_HUMAN
[Raw transfer]




ANP_B_12(3FHT)
DD19B_HUMAN
[Raw transfer]




ANP_A_7(3FHT)
DD19B_HUMAN
[Raw transfer]




ANP_A_3(4D25)
?
[Raw transfer]




ANP_A_3(3G0H)
DD19B_HUMAN
[Raw transfer]




ADP_A_3(3PEY)
DBP5_YEAST
[Raw transfer]




ADP_A_3(4D26)
?
[Raw transfer]




ANP_A_2(5E7M)
DDX3X_HUMAN
[Raw transfer]




ADP_A_3(3PEW)
DBP5_YEAST
[Raw transfer]




ADP_A_3(3PEY)
DBP5_YEAST
[Raw transfer]




ANP_A_7(2J0S)
IF4A3_HUMAN
[Raw transfer]




ADP_A_4(3FE2)
DDX5_HUMAN
[Raw transfer]




ADP_A_4(4PX9)
DDX3X_HUMAN
[Raw transfer]




ADP_B_8(3FE2)
DDX5_HUMAN
[Raw transfer]




ADP_B_5(4PX9)
DDX3X_HUMAN
[Raw transfer]




M2A_A_3(5ELX)
?
[Raw transfer]




ADP_A_3(2PL3)
DDX10_HUMAN
[Raw transfer]




ADP_A_2(4PXA)
DDX3X_HUMAN
[Raw transfer]




ADP_C_6(4PX9)
DDX3X_HUMAN
[Raw transfer]




ADP_A_3(2OXC)
DDX20_HUMAN
[Raw transfer]




AMP_B_9(2GXS)
?
[Raw transfer]




AMP_A_2(2GXQ)
?
[Raw transfer]




AMP_B_5(3IUY)
DDX53_HUMAN
[Raw transfer]




ADP_B_4(2OXC)
DDX20_HUMAN
[Raw transfer]




ADP_A_4(3RRM)
DBP5_YEAST
[Raw transfer]




ADP_B_4(3FMO)
DD19B_HUMAN
[Raw transfer]




AMP_A_2(2I4I)
DDX3X_HUMAN
[Raw transfer]




AMP_A_8(2GXS)
?
[Raw transfer]




ADP_A_2(4PXA)
DDX3X_HUMAN
[Raw transfer]




AMP_A_2(5E7J)
DDX3X_HUMAN
[Raw transfer]




AMP_A_3(3IUY)
DDX53_HUMAN
[Raw transfer]




8OX_B_6(3MWL)
?
[Raw transfer]




ADP_A_3(3RRN)
DBP5_YEAST
[Raw transfer]




AMP_A_2(2I4I)
DDX3X_HUMAN
[Raw transfer]




AMP_B_6(2VSO)
IF4A_YEAST
[Raw transfer]




AMP_A_3(4KBF)
?
[Raw transfer]




AMP_A_3(4KBF)
?
[Raw transfer]




AMP_A_5(2VSX)
IF4A_YEAST
[Raw transfer]




8OP_B_6(3MWK)
?
[Raw transfer]




ADP_A_3(3EWS)
DD19B_HUMAN
[Raw transfer]




AMP_A_5(2VSO)
IF4A_YEAST
[Raw transfer]




AMP_A_3(3BER)
DDX47_HUMAN
[Raw transfer]




AMP_B_6(2VSX)
IF4A_YEAST
[Raw transfer]




8OD_C_11(3NBF)
?
[Raw transfer]




8OD_A_6(3NBF)
?
[Raw transfer]




8OD_D_13(3NBF)
?
[Raw transfer]




8OD_B_8(3NBF)
?
[Raw transfer]




FLC_C_3(1T6N)
DX39B_HUMAN
[Raw transfer]




FLC_D_4(1T6N)
DX39B_HUMAN
[Raw transfer]




1PE_A_4(4BRW)
DHH1_YEAST
[Raw transfer]




NACID_D_2(4D25)
?
[Raw transfer]

-

TLA_B_4(1VEC)
DDX6_HUMAN
[Raw transfer]




IPA_D_4(1XTI)
DX39B_HUMAN
[Raw transfer]




NACID_E_1(2DB3)
VASA1_DROME
[Raw transfer]

-

NACID_I_9(4DB2)

[Raw transfer]

-

NACID_E_5(4DB2)
MS116_YEAST
[Raw transfer]

-

NACID_J_10(4DB2)
MS116_YEAST
[Raw transfer]

-

134 HHSearch 90.6343%-117 - C3 -1HV8 - H669_METJA -
1 PsiBlast_PDB 90.1442%-123 - C3 -1HV8 - H669_METJA -
130 HHSearch 89.3044%-108 - C3 -4KBF 5.3 ?
4 PsiBlast_PDB 89.2444%-110 - C3 -4KBF 5.3 ?
133 HHSearch 89.0337%-120 - C3 -2I4I 6.2 DDX3X_HUMAN
23 PsiBlast_CBE 88.9444%-113 - C3 -4KBG - ? -
24 PsiBlast_CBE 88.8644%-118 - C3 -4KBF - ? -
117 HHSearch 88.3037%-109 - C3 -4PXA 5.0 DDX3X_HUMAN
114 HHSearch 87.0237%-120 - C3 -3EIQ - IF4A1_HUMAN -
17 PsiBlast_PDB 86.9936%-102 - C3 -4D25 9.6 ?
127 HHSearch 86.9133%-123 - C3 -4LJY - PRP5_YEAST -
9 PsiBlast_PDB 86.7537%-116 - C3 -2J0S 8.5 IF4A3_HUMAN
3 PsiBlast_PDB 86.5237%-114 - C3 -3EX7 - IF4A3_HUMAN -
18 PsiBlast_PDB 86.5136% -99 - C3 -4D26 7.3 ?
6 PsiBlast_PDB 86.5037%-114 - C3 -2XB2 - IF4A3_HUMAN -
38 PsiBlast_CBE 86.4232%-122 - C3 -4CT4 - DDX6_HUMAN -
2 PsiBlast_PDB 86.4137%-115 - C3 -2HYI - IF4A3_HUMAN -
44 PsiBlast_CBE 86.3934%-126 - C3 -3EWS 3.5 DD19B_HUMAN
119 HHSearch 86.3732%-122 - C3 -5ANR - DDX6_HUMAN -
118 HHSearch 86.3536%-102 - C3 -4D25 12.5 ?
34 PsiBlast_CBE 85.4635%-114 - C3 -2I4I 6.2 DDX3X_HUMAN
20 PsiBlast_PDB 85.3835%-104 - C3 -4PXA 5.0 DDX3X_HUMAN
31 PsiBlast_CBE 85.1438%-135 - C3 -2VSO 4.8 IF4A_YEAST
41 PsiBlast_CBE 85.1334%-111 - C3 -3G0H 6.9 DD19B_HUMAN
12 PsiBlast_PDB 85.1038%-134 - C3 -2VSO 5.0 IF4A_YEAST
126 HHSearch 84.8437%-103 - C3 -2DB3 11.3 VASA1_DROME
43 PsiBlast_CBE 84.8434%-115 - C3 -3FHT 6.8 DD19B_HUMAN
33 PsiBlast_CBE 84.8335%-103 - C3 -5E7J 6.1 DDX3X_HUMAN
30 PsiBlast_CBE 84.7438%-132 - C3 -2VSX 3.4 IF4A_YEAST
13 PsiBlast_PDB 84.6938%-132 - C3 -2VSX 3.3 IF4A_YEAST
125 HHSearch 84.3033%-110 - C3 -3FHT 6.8 DD19B_HUMAN
129 HHSearch 84.0235%-125 - C3 -1XTI 3.7 DX39B_HUMAN
42 PsiBlast_CBE 83.7134%-112 - C3 -3FHT 7.4 DD19B_HUMAN
32 PsiBlast_CBE 83.4835%-101 - C3 -5E7M 4.8 DDX3X_HUMAN
40 PsiBlast_CBE 82.5933%-115 - C3 -4BRW 2.4 DHH1_YEAST
47 PsiBlast_CBE 81.4234%-109 - C3 -3RRN 3.8 DBP5_YEAST
132 HHSearch 80.1235%-113 - C3 -3PEY 5.9 DBP5_YEAST
50 PsiBlast_CBE 79.8133%-117 - C3 -3PEY 5.9 DBP5_YEAST
49 PsiBlast_CBE 79.3234%-111 - C3 -3PEW 7.2 DBP5_YEAST
51 PsiBlast_CBE 78.7233%-112 - C3 -5ELX 7.1 ?
48 PsiBlast_CBE 76.8634%-115 - C3 -3RRM 5.0 DBP5_YEAST
54 PsiBlast_CBE 70.2846%-127 - C3 -2GXS 5.2 ?
57 PsiBlast_CBE 70.1946%-128 - C3 -3NBF 5.5 ?
55 PsiBlast_CBE 69.7246%-128 - C3 -2GXQ 5.9 ?
53 PsiBlast_CBE 69.6546%-129 - C3 -2GXS 5.0 ?
59 PsiBlast_CBE 69.4246%-124 - C3 -3NBF 5.2 ?
56 PsiBlast_CBE 69.1746%-133 - C3 -3NBF 5.5 ?
58 PsiBlast_CBE 69.1646%-124 - C3 -3NBF 5.9 ?
60 PsiBlast_CBE 68.8446%-130 - C3 -3MWL 3.9 ?
62 PsiBlast_CBE 68.6546%-128 - C3 -3MWK 4.0 ?
76 PsiBlast_CBE 66.2235%-120 - C3 -3FMO 5.9 DD19B_HUMAN
78 PsiBlast_CBE 66.0235%-114 - C3 -4PX9 5.4 DDX3X_HUMAN
70 PsiBlast_CBE 65.9535%-117 - C3 -1T6N 2.9 DX39B_HUMAN
77 PsiBlast_CBE 65.8335%-115 - C3 -4PX9 5.5 DDX3X_HUMAN
79 PsiBlast_CBE 65.5235%-115 - C3 -4PX9 5.6 DDX3X_HUMAN
81 PsiBlast_CBE 65.4236%-128 - C3 -3IUY 5.5 DDX53_HUMAN
75 PsiBlast_CBE 65.2237%-118 - C3 -3FE2 4.1 DDX5_HUMAN
71 PsiBlast_CBE 64.9635%-116 - C3 -1T6N 2.5 DX39B_HUMAN
74 PsiBlast_CBE 64.8137%-116 - C3 -3FE2 6.3 DDX5_HUMAN
72 PsiBlast_CBE 64.5334%-119 - C3 -1VEC 2.0 DDX6_HUMAN
80 PsiBlast_CBE 64.0136%-126 - C3 -3IUY 6.2 DDX53_HUMAN
67 PsiBlast_CBE 63.8340%-117 - C3 -3BER 5.5 DDX47_HUMAN
86 PsiBlast_CBE 62.0731%-113 - C3 -2OXC 6.4 DDX20_HUMAN
85 PsiBlast_CBE 61.3431%-116 - C3 -2OXC 6.8 DDX20_HUMAN
82 PsiBlast_CBE 60.3433%-111 - C3 -2PL3 6.4 DDX10_HUMAN
96 PsiBlast_CBE 27.4335% -28 - C3 -4DB2 4.9 MS116_YEAST
95 PsiBlast_CBE 26.5135% -27 - C3 -4DB2 4.6 MS116_YEAST
94 PsiBlast_CBE 20.9135% -15 - C3 -4DB2 4.6