@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1262c: (2016-04-30 )
MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRDPDREATGRILREALAQQDAAAQD

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMP_B_8(3O0M)
?
[Raw transfer]




AMP_A_5(3O0M)
?
[Raw transfer]




AMP_A_5(3O0M)
?
[Raw transfer]




ADN_A_2(3O1C)
HINT1_RABIT
[Raw transfer]




UNL_A_5(3LB5)
?
[Raw transfer]




EDO_A_6(3P0T)
?
[Raw transfer]




UNL_C_7(3LB5)
?
[Raw transfer]




EDO_A_12(3N1S)
HINT_ECOLI
[Raw transfer]




1 PsiBlast_PDB 96.9475%-123 - C5 -3O0M 5.5 ?
21 PsiBlast_CBE 95.0575%-121 - C5 -3O0M 5.7 ?
67 HHSearch 93.0375%-116 - C5 -3O0M 5.5 ?
38 PsiBlast_CBE 68.1931%-106 - C5 -3P0T - ? -
2 PsiBlast_PDB 67.2931%-102 - C5 -2EO4 - ? -
39 PsiBlast_CBE 67.1431%-105 - C5 -3P0T - ? -
69 HHSearch 65.5733%-113 - C5 -3LB5 2.5 ?
28 PsiBlast_CBE 65.1440%-142 - C5 -1Y23 - HIT_BACSU -
5 PsiBlast_PDB 65.0740%-139 - C5 -1Y23 - HIT_BACSU -
27 PsiBlast_CBE 65.0140%-136 - C5 -1Y23 - HIT_BACSU -
24 PsiBlast_CBE 64.9541%-143 - C5 -3IMI - ? -
22 PsiBlast_CBE 64.9441%-145 - C5 -3IMI - ? -
70 HHSearch 64.7032%-112 - C5 -1Y23 - HIT_BACSU -
45 PsiBlast_CBE 64.4434%-130 - C5 -4ZKV - ? -
44 PsiBlast_CBE 64.4434%-132 - C5 -4ZKV - ? -
40 PsiBlast_CBE 64.2934%-133 - C5 -1KPF - HINT1_HUMAN -
26 PsiBlast_CBE 64.2640%-133 - C5 -1Y23 - HIT_BACSU -
4 PsiBlast_PDB 64.1341%-141 - C5 -3IMI - ? -
25 PsiBlast_CBE 64.0340%-138 - C5 -1Y23 - HIT_BACSU -
48 PsiBlast_CBE 64.0034%-126 - C5 -4EQH - HINT1_HUMAN -
29 PsiBlast_CBE 60.9336%-110 - C5 -3LB5 2.6 ?
85 HHSearch 56.8831%-120 - C5 -3O1C 4.6 HINT1_RABIT