@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1266c: (2016-04-30 )
MSDAQDSRVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARIAGRLQEPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASALDAAHADGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERFSNDEVTYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPGIPKAFDAVVARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQESTLPAPPKPVPPPTMPATAMAPRQPPAPPVTPPGVQPAPKPSYTPPAQPGPAGQRPGPTGQPSWAPNSGPMPASGPTPTPQYYQGGGWGAPPSGGPSPWAQTPRKTNPWPLVAGAAAVVLVLVLGAIGIWIAIRPKPVQPPQPVAEERLSALLLNSSEVNAVMGSSSMQPGKPITSMDSSPVTVSLPDCQGALYTSQDPVYAGTGYTAINGLISSEPGDNYEHWVNQAVVAFPTADKARAFVQTSADKWKNCAGKTVTVTNKAKTYRWTFADVKGSPPTITVIDTQEGAEGWECQRAMSVANNVVVDVNACGYRITNQAGQIAAKIVDKVNKE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_A_2(3ORK)
?
[Raw transfer]



ACP_A_2(1O6Y)
PKNB_MYCTU
[Raw transfer]



AGS_A_2(3ORM)
?
[Raw transfer]



AGS_A_2(3ORP)
?
[Raw transfer]



ADP_A_2(3F61)
PKNB_MYCTU
[Raw transfer]



AGS_A_2(3ORT)
?
[Raw transfer]



GOL_A_6(4GV1)
AKT1_HUMAN
[Raw transfer]



MIX_E_5(2FUM)
PKNB_MYCTU
[Raw transfer]



MIX_G_7(2FUM)
PKNB_MYCTU
[Raw transfer]
51 Fugue 72.9598% -90 - C2 -4ESQ - -
1 PsiBlast_PDB 72.9099% -89 * C2 *4ESQ - -
2 PsiBlast_PDB 67.3340% -93 - C1 -3F61 5.3 PKNB_MYCTU
8 PsiBlast_PDB 66.6740% -90 - C1 -2FUM 5.3 PKNB_MYCTU
4 PsiBlast_PDB 66.2140% -85 - C1 -3ORO - ? -
9 PsiBlast_PDB 65.8039% -91 - C1 -3ORM 6.7 ?
7 PsiBlast_PDB 65.6040% -92 - C1 -1O6Y 5.4 PKNB_MYCTU
5 PsiBlast_PDB 65.3340% -91 - C1 -3ORP 6.9 ?
3 PsiBlast_PDB 65.1640% -92 - C1 -3ORK 4.9 ?
21 PsiBlast_CBE 65.1440% -96 - C1 -2FUM 6.3 PKNB_MYCTU
6 PsiBlast_PDB 64.6440% -89 - C1 -3ORT 7.0 ?
10 PsiBlast_PDB 63.7542% -85 - C1 -4OW8 - PKNA_MYCTU -
24 PsiBlast_CBE 63.5932% -99 - C1 -4EQM - ? -
13 PsiBlast_PDB 63.3931% -99 - C1 -4YOM - ? -
23 PsiBlast_CBE 63.2732% -97 - C1 -4EQM - ? -
22 PsiBlast_CBE 63.0632% -97 - C1 -4EQM - ? -
49 HHSearch 62.7624% -92 - C1 -4FR4 - ST32A_HUMAN -
26 PsiBlast_CBE 62.3332% -93 - C1 -4EQM - ? -
25 PsiBlast_CBE 62.1732% -93 - C1 -4EQM - ? -
12 PsiBlast_PDB 60.9432% -92 - C1 -4EQM - ? -