@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1272c: (2016-04-30 )
MTAPPGARPRAASPPPNMRSRDFWGSAARLVKRLAPQRRLSIAVITLGIAGTTIGVIVPRILGHATDLLFNGVIGRGLPGGITKAQAVASARARGDNTFADLLSGMNVVPGQGVDFAAVERTLALALALYLAAALMIWAQARLLNLTVQKTMVRLRTDVEDKVHRLPLSYFDGQQRGELLSRVTNDIDNLQSSLSMTISQLVTSILTMVAVLAMMVSISGLLALITLLTVPLSLLVTRAITRRSQPLFVAHWTSTGRLNAHLEETYSGFTVVKTFGHQAAARERFHELNDDVYQAGFGAQFLSGLVQPATAFIGNLGYVAVAVAGGLQVATGQITLGSIQAFIQYIRQFNMPLSQLAGMYNALQSGVASAERVFDVLDEPEESPEPEPELPNLTGRVEFEHVNFAYLPGTPVIRDLSLVAEPGSTVAIVGPTGAGKTTLVNLLMRFYEIGSGRILIDGVDIASVSRQSLRSRIGMVLQDTWLYDGTIAENIAYGRPEATTDEIVEAARAAHVDRFVNTLPAGYQTRVSGDGGSISVGEKQLITIARAFLARPQLLILDEATSSVDTRTELLIQRAMRELRRDRTSFIIAHRLSTIRDADHILVVQTGQIVERGNHAELLARRGVYYQMTRA

Atome Classification :

(49 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ADP_A_3(3NHA)

[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ATP_C_12(2IXF)
TAP1_RAT
[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_A_2(2IXG)

[Raw transfer]




ATP_D_15(2IXF)

[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ADP_A_2(5DGX)

[Raw transfer]




ATP_B_8(2IXF)
TAP1_RAT
[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




ATP_A_5(2IXF)
TAP1_RAT
[Raw transfer]




ATP_A_7(1MV5)
LMRA_LACLA
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ADP_A_3(1JJ7)

[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




AGS_A_3(4S0F)
?
[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ANP_A_2(4AYW)
ABCBA_HUMAN
[Raw transfer]




AGS_B_4(4S0F)
?
[Raw transfer]




115 HHSearch 90.1741%-119 - C1 -4Q4H - Y288_THEMA -
1 PsiBlast_PDB 89.4037%-121 - C1 -3QF4 - Y288_THEMA -
2 PsiBlast_PDB 88.6937%-121 - C1 -4Q4A - Y288_THEMA -
4 PsiBlast_PDB 88.1837%-119 - C1 -4Q4J - Y288_THEMA -
3 PsiBlast_PDB 88.0237%-116 - C1 -4Q4H - Y288_THEMA -
119 HHSearch 82.8833%-113 - C1 -4Q4H - ? -
116 HHSearch 80.4432%-109 - C1 -3ZDQ - ABCBA_HUMAN -
24 PsiBlast_CBE 80.3535%-111 - C1 -3QF4 - ? -
23 PsiBlast_CBE 80.0035%-111 - C1 -4Q4A - ? -
117 HHSearch 79.7730%-115 - C1 -4MRS - ATM1_NOVAD -
18 PsiBlast_PDB 78.0933%-111 - C1 -4AYX 5.4 ABCBA_HUMAN
19 PsiBlast_PDB 77.6033%-110 - C1 -3ZDQ - ABCBA_HUMAN -
17 PsiBlast_PDB 76.8333%-109 - C1 -4AYT 6.1 ABCBA_HUMAN
121 HHSearch 76.6729%-111 - C1 -3WMG - ? -
112 HHSearch 76.5328%-116 - C1 -4RY2 - ? -
103 Fugue 75.2031%-102 - C1 -3B60 - MSBA_SALTY -
113 HHSearch 75.0431%-103 - C1 -3B60 - MSBA_SALTY -
40 PsiBlast_CBE 74.5733%-106 - C1 -3WMG - ? -
124 HHSearch 74.1629%-110 - C1 -4Q9H - MDR1A_MOUSE -
20 PsiBlast_PDB 73.8632%-112 - C1 -4AYW 5.2 ABCBA_HUMAN
21 PsiBlast_CBE 72.0633%-106 - C1 -2ONJ 6.3 Y1866_STAAM
16 PsiBlast_PDB 69.9131%-103 - C1 -4S0F 5.6 ?
35 PsiBlast_CBE 69.6031%-107 - C1 -4S0F 1.9 ?
37 PsiBlast_CBE 57.8148%-111 - C1 -3NHA 6.6
71 PsiBlast_CBE 54.8942%-122 - C1 -2PMK 7.0
75 PsiBlast_CBE 54.5641%-120 - C1 -2FGK 7.1 HLYBP_ECOLX
91 PsiBlast_CBE 54.5336%-114 - C1 -2IXF 7.3
86 PsiBlast_CBE 54.3341%-118 - C1 -1XEF 6.8 HLYBP_ECOLX
85 PsiBlast_CBE 53.9641%-120 - C1 -1XEF 6.8 HLYBP_ECOLX
80 PsiBlast_CBE 53.8541%-116 - C1 -2FGJ 6.8 HLYBP_ECOLX
92 PsiBlast_CBE 53.8136%-113 - C1 -2IXF 7.3 TAP1_RAT
79 PsiBlast_CBE 53.7941%-121 - C1 -2FGJ 6.4
69 PsiBlast_CBE 53.7842%-119 - C1 -2FF7 6.8
83 PsiBlast_CBE 53.6441%-119 - C1 -2FFA 6.7
77 PsiBlast_CBE 53.6441%-118 - C1 -2FFB 6.6
93 PsiBlast_CBE 53.4436%-115 - C1 -2IXF 7.0 TAP1_RAT
84 PsiBlast_CBE 53.4441%-117 - C1 -1XEF 6.7
73 PsiBlast_CBE 53.3441%-119 - C1 -2FGK 7.0
87 PsiBlast_CBE 53.2941%-118 - C1 -1XEF 6.3 HLYBP_ECOLX
72 PsiBlast_CBE 53.2942%-118 - C1 -3B5J 7.2
81 PsiBlast_CBE 52.9641%-115 - C1 -2FGJ 7.0 HLYBP_ECOLX
90 PsiBlast_CBE 52.9435%-112 - C1 -1JJ7 6.3
74 PsiBlast_CBE 52.2441%-116 - C1 -2FGK 6.4 HLYBP_ECOLX
95 PsiBlast_CBE 52.1235%-111 - C1 -2IXG 6.7
76 PsiBlast_CBE 51.9041%-118 - C1 -2FGK 6.9 HLYBP_ECOLX
94 PsiBlast_CBE 51.6536%-114 - C1 -2IXF 7.1 TAP1_RAT
78 PsiBlast_CBE 51.6038%-116 - C1 -5DGX 6.5
82 PsiBlast_CBE 51.0641%-112 - C1 -2FGJ 6.7 HLYBP_ECOLX
68 PsiBlast_CBE 46.9844%-110 - C1 -1MV5 6.6 LMRA_LACLA