@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1273c: (2016-04-30 )
MLLALLRQHIRPYRRLVAMLMMLQLVSTLASLYLPTVNAAIVDDGVAKGDTATIVRLGAVMLGVTGLQVLCAIGAVYLGSRTGAGFGRDLRSAMFEHIITFSERETARFGAPTLLTRSTNDVRQILFLVQMTATVLVTAPIMCVGGIIMAIHQEAALTWLLLVSVPILAVANYWIISHMLPLFRRMQSLIDGINRVMRDQLSGVRVVRAFTREGYERDKFAQANTALSNAALSAGNWQALMLPVTTLTINASSVALIWFGGLRIDSGQMQVGSLIAFLSYFAQILMAVLMATMTLAVLPRASVCAERITEVLSTPAALGNPDNPKFPTDGVTGVVRLAGATFTYPGADCPVLQDISLTARPGTTTAIVGSTGSGKSTLVSLICRLYDVTAGAVLVDGIDVREYHTERLWSAIGLVPQRSYLFSGTVADNLRYGGGPDQVVTEQEMWEALRVAAADGFVQTDGLQTRVAQGGVNFSGGQRQRLAIARAVIRRPAIYVFDDAFSALDVHTDAKVHASLRQVSGDATIIVVTQRISNAAQADQVIVVDNGKIVGTGTHETLLADCPTYAEFAASQSLSATVGGVG

Atome Classification :

(64 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(2CBZ)

[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_A_2(4K8O)

[Raw transfer]




ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]




ANP_A_3(3QF4)
?
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ANP_A_3(4Q4A)
?
[Raw transfer]




ADP_A_2(5DGX)

[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ATP_A_3(2IXE)
TAP1_RAT
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]




ATP_D_6(2IXE)

[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ADP_A_3(1JJ7)

[Raw transfer]




ATP_A_2(2IXG)

[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




ATP_A_3(3VX4)
?
[Raw transfer]




ATP_D_15(2IXF)

[Raw transfer]




ATP_B_8(2IXF)
TAP1_RAT
[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_C_12(2IXF)
TAP1_RAT
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ATP_A_5(2IXF)
TAP1_RAT
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




2 PsiBlast_PDB 93.5037%-126 - C1 -4Q4A 5.8 ?
1 PsiBlast_PDB 92.4537%-127 - C1 -3QF4 6.6 ?
119 HHSearch 91.3137%-126 - C1 -4Q4H - ? -
3 PsiBlast_PDB 90.7437%-126 - C1 -4Q4H - ? -
4 PsiBlast_PDB 89.8436%-124 - C1 -4Q4J - ? -
117 HHSearch 78.6828%-119 - C1 -4Q4H - Y288_THEMA -
122 HHSearch 75.0327%-118 - C1 -3WMG - ? -
103 Fugue 73.8927%-112 - C1 -3B60 - MSBA_SALTY -
116 HHSearch 73.2528%-113 - C1 -3ZDQ - ABCBA_HUMAN -
15 PsiBlast_PDB 73.0329%-113 - C1 -3ZDQ - ABCBA_HUMAN -
126 HHSearch 71.8625%-121 - C1 -4Q9H - MDR1A_MOUSE -
114 HHSearch 71.7227%-111 - C1 -3B60 - MSBA_SALTY -
14 PsiBlast_PDB 71.6729%-113 - C1 -4AYX - ABCBA_HUMAN -
13 PsiBlast_PDB 71.5629%-113 - C1 -4AYT 6.0 ABCBA_HUMAN
125 HHSearch 71.4928%-118 - C1 -4Q9H - MDR1A_MOUSE -
5 PsiBlast_PDB 71.4629%-107 - C1 -2HYD 4.5 Y1866_STAAM
6 PsiBlast_PDB 70.9529%-107 - C1 -2ONJ - Y1866_STAAM -
113 HHSearch 70.6522%-123 - C1 -4RY2 - ? -
16 PsiBlast_PDB 70.4829%-114 - C1 -4AYW - ABCBA_HUMAN -
19 PsiBlast_PDB 69.9728%-118 - C1 -4Q9I - MDR1A_MOUSE -
66 PsiBlast_CBE 54.4133%-115 - C1 -2IXE 7.3
29 PsiBlast_CBE 54.3837%-119 - C1 -5DGX 6.7
73 PsiBlast_CBE 52.6332%-110 - C1 -2IXG 7.0
68 PsiBlast_CBE 52.1732%-109 - C1 -2IXF 7.2
69 PsiBlast_CBE 52.1432%-113 - C1 -2IXF 7.1 TAP1_RAT
47 PsiBlast_CBE 51.7534%-116 - C1 -3VX4 6.9 ?
58 PsiBlast_CBE 51.6536%-122 - C1 -1XEF 6.5 HLYBP_ECOLX
70 PsiBlast_CBE 51.5932%-109 - C1 -2IXF 7.1 TAP1_RAT
60 PsiBlast_CBE 51.3136%-117 - C1 -1XEF 5.7 HLYBP_ECOLX
53 PsiBlast_CBE 51.2736%-118 - C1 -2FGJ 6.1 HLYBP_ECOLX
71 PsiBlast_CBE 50.9932%-110 - C1 -2IXF 7.0 TAP1_RAT
72 PsiBlast_CBE 50.8132%-112 - C1 -4K8O 6.5
62 PsiBlast_CBE 50.5736%-113 - C1 -2FGK 5.7 HLYBP_ECOLX
52 PsiBlast_CBE 50.4736%-119 - C1 -2FGJ 5.9
64 PsiBlast_CBE 50.1536%-113 - C1 -2FGK 6.4 HLYBP_ECOLX
67 PsiBlast_CBE 49.7333%-104 - C1 -2IXE 7.3 TAP1_RAT
54 PsiBlast_CBE 49.4736%-115 - C1 -2FGJ 6.4 HLYBP_ECOLX
55 PsiBlast_CBE 49.1636%-118 - C1 -2FGJ 6.3 HLYBP_ECOLX
63 PsiBlast_CBE 49.0436%-116 - C1 -2FGK 6.4 HLYBP_ECOLX
59 PsiBlast_CBE 49.0336%-116 - C1 -1XEF 6.4 HLYBP_ECOLX
45 PsiBlast_CBE 49.0235%-100 - C1 -1JJ7 6.1
57 PsiBlast_CBE 49.0036%-115 - C1 -1XEF 6.1
61 PsiBlast_CBE 48.9736%-116 - C1 -2FGK 6.6
56 PsiBlast_CBE 48.6736%-110 - C1 -2FFA 6.1
49 PsiBlast_CBE 48.4336%-111 - C1 -2FF7 6.1
65 PsiBlast_CBE 47.6836%-109 - C1 -2FFB 6.0
48 PsiBlast_CBE 47.4836%-113 - C1 -2PMK 6.8
51 PsiBlast_CBE 45.5336%-110 - C1 -3B5J 6.5
75 PsiBlast_CBE 42.2331% -97 - C1 -2CBZ 6.5
80 PsiBlast_CBE 38.1532% -95 - C1 -4YMV 4.0 ?
102 PsiBlast_CBE 37.8731% -95 - C1 -2OLJ 4.5 ?
100 PsiBlast_CBE 37.1831% -94 - C1 -2OLK 4.3 ?
82 PsiBlast_CBE 36.9532% -92 - C1 -4YMU 5.1 ?
83 PsiBlast_CBE 36.7432% -95 - C1 -4YMU 4.7 ?
97 PsiBlast_CBE 36.5531% -96 - C1 -2OLK 4.4 ?
81 PsiBlast_CBE 36.4332% -90 - C1 -4YMV 4.2 ?
92 PsiBlast_CBE 35.7431% -91 - C1 -2Q0H 3.4 ?
89 PsiBlast_CBE 35.5931% -93 - C1 -3C4J 3.4 ?
98 PsiBlast_CBE 35.5731% -94 - C1 -2OLK 4.7 ?
99 PsiBlast_CBE 35.1131% -93 - C1 -2OLK 4.4 ?
90 PsiBlast_CBE 34.6831% -87 - C1 -3C4J 4.8 ?
88 PsiBlast_CBE 34.5535% -85 - C1 -4U00 4.5 ?
101 PsiBlast_CBE 33.7931% -91 - C1 -2OLJ 4.0 ?
91 PsiBlast_CBE 33.4731% -92 - C1 -2Q0H 4.5 ?