@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1293: (2016-04-30 )
MNELLHLAPNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLSLEVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLP_A_2(2YXX)
DCDA_THEMA
[Raw transfer]



PLP_A_2(2YXX)
DCDA_THEMA
[Raw transfer]



PLP_B_6(1HKV)
DCDA_MYCTU
[Raw transfer]



LYS_A_3(1KO0)
DCDA_ECOLI
[Raw transfer]



LYS_A_3(3C5Q)
DCDA_HELPX
[Raw transfer]



AZ1_C_3(1TUF)
DCDA_METJA
[Raw transfer]



MES_A_6(1KNW)
DCDA_ECOLI
[Raw transfer]
21 PsiBlast_CBE 99.33100%-120 - C1 -1HKV 3.9 DCDA_MYCTU
22 PsiBlast_CBE 99.2899%-121 - C1 -2O0T - DCDA_MYCTU -
28 HHSearch 99.03100%-118 - C1 -2O0T - DCDA_MYCTU -
2 PsiBlast_PDB 98.7899%-117 - C1 -2O0T - DCDA_MYCTU -
3 PsiBlast_PDB 98.7699%-119 - C1 -1HKW - DCDA_MYCTU -
1 PsiBlast_PDB 98.60100%-119 - C1 -1HKV - DCDA_MYCTU -
31 HHSearch 76.4731%-111 - C1 -1TWI - DCDA_METJA -
5 PsiBlast_PDB 74.5731%-111 - C1 -1TWI - DCDA_METJA -
25 PsiBlast_CBE 74.3331%-111 - C1 -1TWI - DCDA_METJA -
23 PsiBlast_CBE 74.1731%-110 - C1 -1TWI - DCDA_METJA -
46 HHSearch 74.0734%-121 - C1 -2P3E - DCDA_AQUAE -
24 PsiBlast_CBE 73.9131%-111 - C1 -1TWI - DCDA_METJA -
6 PsiBlast_PDB 73.8931%-111 - C1 -1TUF 2.8 DCDA_METJA
44 HHSearch 72.7028%-108 - C1 -2QGH - DCDA_HELPX -
4 PsiBlast_PDB 71.6132%-111 - C1 -2P3E - DCDA_AQUAE -
39 HHSearch 70.8635%-112 - C1 -3VAB - ? -
30 HHSearch 70.7033%-105 - C1 -2YXX 3.3 DCDA_THEMA
10 PsiBlast_PDB 70.0734%-108 - C1 -3VAB - ? -
11 PsiBlast_PDB 69.7231%-105 - C1 -2YXX 3.3 DCDA_THEMA
42 HHSearch 69.7031%-112 - C1 -3N2B - DCDA_VIBCH -