@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1336: (2016-04-30 )
MTRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELLADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYGEGVYALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIALVVADAGWKYLSTGAYAGSLDDAETALEGQLWA

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PUS_A_3(3X44)
DCSD_STRLA
[Raw transfer]



PUS_A_3(3X44)
DCSD_STRLA
[Raw transfer]



PUS_B_4(3X44)
DCSD_STRLA
[Raw transfer]



KOU_A_3(3PC4)
?
[Raw transfer]



P1T_A_3(3PC3)
?
[Raw transfer]



PDA_A_2(2Q3D)
CYSK_MYCTU
[Raw transfer]



CIT_A_4(2V03)
CYSM_ECOLI
[Raw transfer]



CIT_A_4(2V03)
CYSM_ECOLI
[Raw transfer]



CYS_A_2(4LMB)
?
[Raw transfer]



MET_B_4(4JBL)
?
[Raw transfer]



4AT_A_4(2EFY)
?
[Raw transfer]



MET_C_3(1D6S)
CYSK_SALTY
[Raw transfer]



AWH_A_3(3ZEI)
CYSK_MYCTU
[Raw transfer]



ILE_A_3(4IL5)
?
[Raw transfer]



4AT_B_6(2EFY)
?
[Raw transfer]



MET_F_6(1D6S)
CYSK_SALTY
[Raw transfer]



CYS_B_11(3BM5)
?
[Raw transfer]



CHAIN_C_2(4JBN)
?
[Raw transfer]
-
4MV_A_3(2ECO)
?
[Raw transfer]



FGA_B_11(4AIR)
?
[Raw transfer]



PLP_A_4(3DWG)
CYSM_MYCTU
[Raw transfer]



PLP_B_5(3DWG)
CYSM_MYCTU
[Raw transfer]



PLP_A_4(3DWG)
CYSM_MYCTU
[Raw transfer]



PLP_B_7(3DWI)
CYSM_MYCTU
[Raw transfer]



PLP_B_8(2BHS)
CYSM_ECOLI
[Raw transfer]



PLP_A_7(2BHS)
CYSM_ECOLI
[Raw transfer]



PLP_D_11(2BHS)
CYSM_ECOLI
[Raw transfer]



PLP_A_2(2ECQ)
?
[Raw transfer]



PLP_A_3(1VE1)
?
[Raw transfer]



PLP_A_2(2ECO)
?
[Raw transfer]



PLP_B_5(2EFY)
?
[Raw transfer]



PLP_A_3(2EFY)
?
[Raw transfer]



FGA_B_12(4AIR)
?
[Raw transfer]



CYS_A_3(4LMB)
?
[Raw transfer]



CYS_A_3(4LMB)
?
[Raw transfer]



MPD_A_6(2Q3B)
CYSK_MYCTU
[Raw transfer]



3HL_A_3(2ECQ)
?
[Raw transfer]



MPD_A_6(2Q3B)
CYSK_MYCTU
[Raw transfer]



FGA_B_9(4AIR)
?
[Raw transfer]



CHAIN_B_2(3TBH)
?
[Raw transfer]
-
1 PsiBlast_PDB 96.20100% -83 - C4 -3DWG 4.0 CYSM_MYCTU
111 HHSearch 95.5699% -83 - C4 -3DWG 4.0 CYSM_MYCTU
21 PsiBlast_CBE 95.14100% -91 - C4 -3DWG 3.8 CYSM_MYCTU
2 PsiBlast_PDB 95.0499% -89 - C4 -3DKI - CYSM_MYCTU -
22 PsiBlast_CBE 91.9799% -86 - C4 -3DWI 2.9 CYSM_MYCTU
43 PsiBlast_CBE 74.0439% -82 - C4 -3X43 - DCSD_STRLA -
41 PsiBlast_CBE 73.7539% -82 - C4 -3X43 - DCSD_STRLA -
44 PsiBlast_CBE 73.0439% -85 - C4 -3X43 - DCSD_STRLA -
46 PsiBlast_CBE 72.9939% -86 - C4 -3X43 - DCSD_STRLA -
47 PsiBlast_CBE 72.9839% -83 - C4 -3X43 - DCSD_STRLA -
121 HHSearch 72.6336% -76 - C4 -3TBH 5.2 ?
42 PsiBlast_CBE 72.6339% -83 - C4 -3X43 - DCSD_STRLA -
48 PsiBlast_CBE 72.0539% -82 - C4 -3X43 - DCSD_STRLA -
45 PsiBlast_CBE 71.7339% -82 - C4 -3X43 - DCSD_STRLA -
54 PsiBlast_CBE 71.4336% -74 - C4 -3VBE - ? -
120 HHSearch 71.1137% -68 - C4 -3VC3 - ? -
62 PsiBlast_CBE 71.0036% -69 - C4 -3VC3 - ? -
55 PsiBlast_CBE 70.9236% -77 - C4 -3VBE - ? -
52 PsiBlast_CBE 70.8536% -77 - C4 -3VBE - ? -
116 HHSearch 70.6740% -75 - C4 -3X44 5.0 DCSD_STRLA
49 PsiBlast_CBE 70.1239% -76 - C4 -3X44 4.4 DCSD_STRLA
50 PsiBlast_CBE 69.7639% -76 - C4 -3X44 5.0 DCSD_STRLA
117 HHSearch 69.2239% -77 - C4 -2Q3B 3.0 CYSK_MYCTU
9 PsiBlast_PDB 69.1941% -76 - C4 -2ECO 2.9 ?
13 PsiBlast_PDB 68.8538% -76 - C4 -3ZEI 5.1 CYSK_MYCTU
15 PsiBlast_PDB 68.8338% -72 - C4 -2Q3B 3.0 CYSK_MYCTU
14 PsiBlast_PDB 68.8238% -67 - C4 -2Q3D 5.0 CYSK_MYCTU
126 HHSearch 68.6341% -83 - C4 -2V03 3.1 CYSM_ECOLI
33 PsiBlast_CBE 68.1241% -76 - C4 -2EFY 3.6 ?
10 PsiBlast_PDB 67.9641% -73 - C4 -2ECQ 3.1 ?
4 PsiBlast_PDB 67.8641% -77 - C4 -2V03 3.1 CYSM_ECOLI
11 PsiBlast_PDB 67.8441% -76 - C4 -2EFY 3.7 ?
8 PsiBlast_PDB 67.8241% -75 - C4 -1VE1 2.9 ?
25 PsiBlast_CBE 67.4741% -77 - C4 -2BHS 3.5 CYSM_ECOLI
82 PsiBlast_CBE 67.4533% -73 - C4 -4IL5 3.1 ?
78 PsiBlast_CBE 67.2833% -67 - C4 -1D6S 3.2 CYSK_SALTY
83 PsiBlast_CBE 67.1833% -73 - C4 -4JBN 3.2 ?
79 PsiBlast_CBE 67.0033% -67 - C4 -1D6S 3.4 CYSK_SALTY
5 PsiBlast_PDB 66.9041% -78 - C4 -2BHS 3.5 CYSM_ECOLI
85 PsiBlast_CBE 66.4133% -63 - C4 -4JBL 3.2 ?
23 PsiBlast_CBE 65.7141% -76 - C4 -2BHS 3.4 CYSM_ECOLI
124 HHSearch 65.4337% -65 - C4 -4LMB 3.7 ?
56 PsiBlast_CBE 65.1836% -64 - C4 -3PC4 5.7 ?
80 PsiBlast_CBE 65.0132% -80 - C4 -4AIR 3.3 ?
75 PsiBlast_CBE 64.1733% -66 - C4 -3BM5 2.8 ?
57 PsiBlast_CBE 63.9336% -64 - C4 -3PC3 6.7 ?
51 PsiBlast_CBE 63.3437% -59 - C4 -4LMB 3.8 ?