@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1380: (2016-05-01 )
MTPRHLLTAADLSRDDATAILDDADRFAQALVGRDIKKLPTLRGRTVVTMFYENSTRTRVSFEVAGKWMSADVINVSAAGSSVGKGESLRDTALTLRAAGADALIIRHPASGAAHLLAQWTGAHNDGPAVINAGDGTHEHPTQALLDALTIRQRLGGIEGRRIVIVGDILHSRVARSNVMLLDTLGAEVVLVAPPTLLPVGVTGWPATVSHDFDAELPAADAVLMLRVQAERMNGGFFPSVREYSVRYGLTERRQAMLPGHAVVLHPGPMVRGMEITSSVADSSQSAVLQQVSNGVQVRMAVLFHVLVGAQDAGKEGAA

Atome Classification :

(63 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PAL_B_5(4BJH)
PYRB_AQUAE
[Raw transfer]




PAL_B_7(1EKX)
PYRB_ECOLI
[Raw transfer]




PAL_C_11(4KH1)
?
[Raw transfer]




PAL_C_8(1EKX)
PYRB_ECOLI
[Raw transfer]




6PR_A_8(2H3E)
PYRB_ECOLI
[Raw transfer]




PAL_A_5(4KGX)
?
[Raw transfer]




PAL_A_5(4KGV)
?
[Raw transfer]




6PR_C_7(2H3E)
PYRB_ECOLI
[Raw transfer]




PAL_C_8(4KGX)
?
[Raw transfer]




PAL_A_5(4KH1)
?
[Raw transfer]




PAL_C_8(8ATC)
PYRB_ECOLI
[Raw transfer]




PAL_D_4(1ML4)
PYRB_PYRAB
[Raw transfer]




PAL_D_4(1ML4)
PYRB_PYRAB
[Raw transfer]




PAL_A_5(4F04)
PYRB_ECOLI
[Raw transfer]




PAL_C_8(4F04)
PYRB_ECOLI
[Raw transfer]




PAL_C_8(4KGV)
?
[Raw transfer]




PAL_C_10(4KH0)
?
[Raw transfer]




PAL_A_7(1D09)
PYRB_ECOLI
[Raw transfer]




PAL_A_6(1EKX)
PYRB_ECOLI
[Raw transfer]




PAL_C_8(1D09)
PYRB_ECOLI
[Raw transfer]




PAL_A_5(4KH0)
?
[Raw transfer]




PAL_A_7(8ATC)
PYRB_ECOLI
[Raw transfer]




1IP_A_7(2IPO)
PYRB_ECOLI
[Raw transfer]




1IP_C_9(2IPO)
PYRB_ECOLI
[Raw transfer]




CP_A_4(3R7F)
PYRB_BACSU
[Raw transfer]




CP_A_4(3R7F)
PYRB_BACSU
[Raw transfer]




EOP_A_7(2FZC)
PYRB_ECOLI
[Raw transfer]




CP_C_16(3R7F)
PYRB_BACSU
[Raw transfer]




CP_A_9(2I6U)
OTC_MYCTU
[Raw transfer]




CP_B_11(3R7F)
PYRB_BACSU
[Raw transfer]




PCT_A_7(3AT1)
PYRB_ECOLI
[Raw transfer]




EOB_C_10(2FZG)
PYRB_ECOLI
[Raw transfer]




PCT_C_8(3AT1)
PYRB_ECOLI
[Raw transfer]




EOB_A_9(2FZG)
PYRB_ECOLI
[Raw transfer]




EOP_C_8(2FZC)
PYRB_ECOLI
[Raw transfer]




EOZ_C_8(2FZK)
PYRB_ECOLI
[Raw transfer]




EOZ_A_7(2FZK)
PYRB_ECOLI
[Raw transfer]




FLC_B_5(3D6N)
PYRB_AQUAE
[Raw transfer]




PG4_A_4(3LXM)
PYRB_YERPE
[Raw transfer]




AL0_G_9(2AIR)
PYRB_ECOLI
[Raw transfer]




AL0_A_10(2AIR)
PYRB_ECOLI
[Raw transfer]




NCD_G_10(1R0C)
PYRB_ECOLI
[Raw transfer]




MAL_A_5(8AT1)
PYRB_ECOLI
[Raw transfer]




NCD_A_9(1R0C)
PYRB_ECOLI
[Raw transfer]




MAL_C_6(8AT1)
PYRB_ECOLI
[Raw transfer]




MAL_A_5(7AT1)
PYRB_ECOLI
[Raw transfer]




MAL_C_6(7AT1)
PYRB_ECOLI
[Raw transfer]




CP_C_13(1ZA2)
PYRB_ECOLI
[Raw transfer]




CP_A_12(1ZA2)
PYRB_ECOLI
[Raw transfer]




3 PsiBlast_PDB 96.5637%-108 - C7 -3R7F 4.5 PYRB_BACSU
27 PsiBlast_CBE 95.9137%-109 - C7 -3R7F 3.5 PYRB_BACSU
26 PsiBlast_CBE 95.5537%-105 - C7 -3R7F 4.2 PYRB_BACSU
111 HHSearch 95.1437%-103 - C7 -3R7F 4.5 PYRB_BACSU
21 PsiBlast_CBE 95.0437%-106 - C7 -3R7L - PYRB_BACSU -
25 PsiBlast_CBE 93.9937%-105 - C7 -3R7L - PYRB_BACSU -
28 PsiBlast_CBE 93.9337%-106 - C7 -3R7D - PYRB_BACSU -
2 PsiBlast_PDB 93.7137%-104 - C7 -3R7D - PYRB_BACSU -
4 PsiBlast_PDB 93.6537%-104 - C7 -3R7L - PYRB_BACSU -
24 PsiBlast_CBE 93.4937%-106 - C7 -3R7L - PYRB_BACSU -
22 PsiBlast_CBE 93.4737%-104 - C7 -3R7L - PYRB_BACSU -
23 PsiBlast_CBE 93.3237%-104 - C7 -3R7L - PYRB_BACSU -
29 PsiBlast_CBE 92.9137%-107 - C7 -3R7D - PYRB_BACSU -
10 PsiBlast_PDB 92.3434%-119 - C7 -1ML4 7.9 PYRB_PYRAB
5 PsiBlast_PDB 89.1335%-105 - C7 -3D6N 3.7 PYRB_AQUAE
33 PsiBlast_CBE 88.9434%-102 - C7 -3E2P - PYRB_METJA -
41 PsiBlast_CBE 88.4534%-103 - C7 -2RGW - PYRB_METJA -
8 PsiBlast_PDB 88.2734%-101 - C7 -3E2P - PYRB_METJA -
36 PsiBlast_CBE 88.1334%-100 - C7 -3E2P - PYRB_METJA -
30 PsiBlast_CBE 88.1234%-101 - C7 -3E2P - PYRB_METJA -
6 PsiBlast_PDB 87.9735%-104 - C7 -4BJH 6.2 PYRB_AQUAE
100 PsiBlast_CBE 87.6631%-108 - C7 -3AT1 3.1 PYRB_ECOLI
122 HHSearch 87.5933%-105 - C7 -1ML4 8.0 PYRB_PYRAB
53 PsiBlast_CBE 86.2431%-103 - C7 -4KGX 7.8 ?
99 PsiBlast_CBE 86.2131%-105 - C7 -3AT1 3.1 PYRB_ECOLI
48 PsiBlast_CBE 86.1131%-105 - C7 -4KH1 8.1 ?
68 PsiBlast_CBE 86.0431%-105 - C7 -2FZG 2.9 PYRB_ECOLI
54 PsiBlast_CBE 85.8731%-105 - C7 -4KGX 7.9 ?
70 PsiBlast_CBE 85.8431%-105 - C7 -2FZC 2.2 PYRB_ECOLI
92 PsiBlast_CBE 85.7831%-105 - C7 -1EKX 7.6 PYRB_ECOLI
58 PsiBlast_CBE 85.7631%-106 - C7 -4F04 7.8 PYRB_ECOLI
67 PsiBlast_CBE 85.6931%-104 - C7 -2FZK 3.8 PYRB_ECOLI
50 PsiBlast_CBE 85.6931%-107 - C7 -4KH0 8.2 ?
96 PsiBlast_CBE 85.6131%-102 - C7 -8AT1 2.6 PYRB_ECOLI
91 PsiBlast_CBE 85.4831%-106 - C7 -1EKX 7.5 PYRB_ECOLI
98 PsiBlast_CBE 85.3731%-103 - C7 -7AT1 2.1 PYRB_ECOLI
56 PsiBlast_CBE 85.2831%-106 - C7 -4KGV 8.0 ?
73 PsiBlast_CBE 85.2731%-104 - C7 -2AIR 3.1 PYRB_ECOLI
11 PsiBlast_PDB 85.2032%-120 - C7 -3LXM 2.7 PYRB_YERPE
47 PsiBlast_CBE 85.1331%-102 - C7 -4KH1 7.8 ?
49 PsiBlast_CBE 84.9131%-105 - C7 -4KH0 8.0 ?
94 PsiBlast_CBE 84.8631%-101 - C7 -8ATC 6.1 PYRB_ECOLI
90 PsiBlast_CBE 84.8331%-104 - C7 -1EKX 7.6 PYRB_ECOLI
75 PsiBlast_CBE 84.8331%-106 - C7 -1ZA2 2.8 PYRB_ECOLI
59 PsiBlast_CBE 84.7331%-104 - C7 -4F04 8.0 PYRB_ECOLI
55 PsiBlast_CBE 84.7331%-104 - C7 -4KGV 8.0 ?
69 PsiBlast_CBE 84.6531%-100 - C7 -2FZG 5.1 PYRB_ECOLI
64 PsiBlast_CBE 84.5931%-101 - C7 -2H3E 7.2 PYRB_ECOLI
66 PsiBlast_CBE 84.5631%-103 - C7 -2FZK 2.3 PYRB_ECOLI
62 PsiBlast_CBE 84.5531%-102 - C7 -2IPO 6.5 PYRB_ECOLI
93 PsiBlast_CBE 84.4431%-101 - C7 -8ATC 6.4 PYRB_ECOLI
76 PsiBlast_CBE 84.3931%-107 - C7 -1R0C 3.6 PYRB_ECOLI
14 PsiBlast_PDB 84.1431%-101 - C7 -1D09 7.1 PYRB_ECOLI
71 PsiBlast_CBE 84.0731%-101 - C7 -2FZC 3.3 PYRB_ECOLI
65 PsiBlast_CBE 84.0331%-102 - C7 -2H3E 7.3 PYRB_ECOLI
46 PsiBlast_CBE 83.8931%-102 - C7 -1D09 6.8 PYRB_ECOLI
74 PsiBlast_CBE 83.8531%-104 - C7 -1ZA2 2.9 PYRB_ECOLI
63 PsiBlast_CBE 83.8431%-102 - C7 -2IPO 6.0 PYRB_ECOLI
77 PsiBlast_CBE 83.6131%-104 - C7 -1R0C 3.7 PYRB_ECOLI
95 PsiBlast_CBE 83.4031%-101 - C7 -8AT1 2.8 PYRB_ECOLI
72 PsiBlast_CBE 83.3431%-101 - C7 -2AIR 2.9 PYRB_ECOLI
97 PsiBlast_CBE 83.0431%-101 - C7 -7AT1 2.6 PYRB_ECOLI
114 HHSearch 82.0030% -87 - C7 -2I6U 3.8 OTC_MYCTU