@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1437: (2016-05-01 )
MSVANLKDLLAEGVSGRGVLVRSDLNVPLDEDGTITDAGRIIASAPTLKALLDADAKVVVAAHLGRPKDGPDPTLSLAPVAVALGEQLGRHVQLAGDVVGADALARAEGLTGGDILLLENIRFDKRETSKNDDDRRALAKQLVELVGTGGVFVSDGFGVVHRKQASVYDIATLLPHYAGTLVADEMRVLEQLTSSTQRPYAVVLGGSKVSDKLGVIESLATKADSIVIGGGMCFTFLAAQGFSVGTSLLEDDMIEVCRGLLETYHDVLRLPVDLVVTEKFAADSPPQTVDVGAVPNGLMGLDIGPGSIKRFSTLLSNAGTIFWNGPMGVFEFPAYAAGTRGVAEAIVAATGKGAFSVVGGGDSAAAVRAMNIPEGAFSHISTGGGASLEYLEGKTLPGIEVLSREQPTGGVL

Atome Classification :

(64 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_4(2WZB)
PGK1_HUMAN
[Raw transfer]




ADP_A_5(2WZC)
PGK1_HUMAN
[Raw transfer]




ADP_A_4(2WZB)
PGK1_HUMAN
[Raw transfer]




ACP_A_4(2X14)
PGK1_HUMAN
[Raw transfer]




ADP_A_4(4AXX)
PGK1_HUMAN
[Raw transfer]




ATP_A_3(1VJD)
PGK1_PIG
[Raw transfer]




ADP_A_3(2XE7)
PGK1_HUMAN
[Raw transfer]




ANP_A_3(1VPE)
PGKT_THEMA
[Raw transfer]




ADP_A_3(2X15)
PGK1_HUMAN
[Raw transfer]




ADP_A_6(3ZOZ)
PGK1_HUMAN
[Raw transfer]




ANP_A_3(1VPE)
PGKT_THEMA
[Raw transfer]




ADP_A_5(2WZD)
PGK1_HUMAN
[Raw transfer]




ADP_A_4(2X13)
PGK1_HUMAN
[Raw transfer]




ANP_A_4(3ZLB)
PGK_STRP2
[Raw transfer]




ATP_A_3(2PAA)
PGK2_MOUSE
[Raw transfer]




ADP_A_3(1PHP)
PGK_GEOSE
[Raw transfer]




ANP_A_4(3ZLB)
PGK_STRP2
[Raw transfer]




ADP_A_3(1PHP)
PGK_GEOSE
[Raw transfer]




MAP_A_2(1QPG)
PGK_YEAST
[Raw transfer]




ACP_A_4(1KF0)
PGK1_PIG
[Raw transfer]




BIS_A_2(16PK)
PGKC_TRYBB
[Raw transfer]




ATP_A_3(1VJC)
PGK1_PIG
[Raw transfer]




BIS_A_2(16PK)
PGKC_TRYBB
[Raw transfer]




ADP_B_7(4NG4)
PGK_COXBU
[Raw transfer]




ADP_A_5(4NG4)
PGK_COXBU
[Raw transfer]




MAP_A_2(1QPG)
PGK_YEAST
[Raw transfer]




ADP_C_9(4NG4)
PGK_COXBU
[Raw transfer]




LA8_D_8(2Y3I)
PGK1_HUMAN
[Raw transfer]




ADP_A_2(2ZGV)
PGK1_HUMAN
[Raw transfer]




ADP_A_5(4NG4)
PGK_COXBU
[Raw transfer]




LA8_A_5(2Y3I)
PGK1_HUMAN
[Raw transfer]




ACP_A_3(2XE8)
PGK1_HUMAN
[Raw transfer]




LA8_A_4(2YBE)
PGK1_HUMAN
[Raw transfer]




AMP_A_2(1HDI)
PGK1_PIG
[Raw transfer]




ADP_B_6(3C3A)
PGK1_HUMAN
[Raw transfer]




ADP_A_2(4FEY)
PGK_FRATT
[Raw transfer]




CDP_A_5(3C3C)
PGK1_HUMAN
[Raw transfer]




ADP_A_2(4FEY)
PGK_FRATT
[Raw transfer]




FMT_A_5(3Q3V)
PGK_CAMJE
[Raw transfer]




FMT_A_5(3Q3V)
PGK_CAMJE
[Raw transfer]




GOL_E_5(1FW8)
PGK_YEAST
[Raw transfer]




GOL_E_5(1FW8)
PGK_YEAST
[Raw transfer]




GOL_E_5(1FW8)
PGK_YEAST
[Raw transfer]




CDF_B_5(3C3B)
PGK1_HUMAN
[Raw transfer]




3PG_A_4(1VPE)
PGKT_THEMA
[Raw transfer]




3PG_A_7(2Y3I)
PGK1_HUMAN
[Raw transfer]




3PG_A_3(3C39)
PGK1_HUMAN
[Raw transfer]




3PG_A_2(2P9T)
PGK2_MOUSE
[Raw transfer]




3PG_A_2(2XE6)
PGK1_HUMAN
[Raw transfer]




TZN_A_2(4O3F)
PGK1_MOUSE
[Raw transfer]




3PG_B_6(3C3C)
PGK1_HUMAN
[Raw transfer]




3PG_B_4(3C39)
PGK1_HUMAN
[Raw transfer]




3PG_A_4(3C3A)
PGK1_HUMAN
[Raw transfer]




TZN_A_2(4O33)
PGK1_HUMAN
[Raw transfer]




3PG_B_6(2CUN)
PGK_PYRHO
[Raw transfer]




3PG_A_5(2CUN)
PGK_PYRHO
[Raw transfer]




3PG_A_5(2CUN)
PGK_PYRHO
[Raw transfer]




ATP_A_3(3PGK)
PGK_YEAST
[Raw transfer]




3PG_B_4(2PAA)
PGK2_MOUSE
[Raw transfer]




71 HHSearch 96.7448%-110 - C9 -1VPE 8.4 PGKT_THEMA
6 PsiBlast_PDB 95.1643%-113 - C9 -1PHP 7.7 PGK_GEOSE
72 HHSearch 95.1342%-117 * C9 *3Q3V 3.0 PGK_CAMJE
68 HHSearch 94.8544%-116 - C9 -1PHP 7.7 PGK_GEOSE
78 HHSearch 94.8441%-111 - C9 -16PK 6.5 PGKC_TRYBB
73 HHSearch 94.8349%-118 - C9 -1V6S - PGK_THET8 -
11 PsiBlast_PDB 94.8141%-116 - C9 -3Q3V 3.0 PGK_CAMJE
1 PsiBlast_PDB 94.6548%-112 - C9 -1VPE 8.4 PGKT_THEMA
2 PsiBlast_PDB 94.2948%-112 - C9 -1V6S - PGK_THET8 -
21 PsiBlast_CBE 94.2848%-110 - C9 -1V6S - PGK_THET8 -
81 HHSearch 92.8639%-113 - C9 -1QPG 8.0 PGK_YEAST
76 HHSearch 92.8243%-113 - C9 -4FEY 5.6 PGK_FRATT
70 HHSearch 92.5945%-114 - C9 -3ZLB 7.7 PGK_STRP2
79 HHSearch 92.3643%-114 - C9 -1ZMR - PGK_ECOLI -
46 PsiBlast_CBE 92.3341%-123 - C9 -1ZMR - PGK_ECOLI -
7 PsiBlast_PDB 92.2241%-114 - C9 -4FEY 5.6 PGK_FRATT
10 PsiBlast_PDB 92.0339%-110 - C9 -16PK 6.5 PGKC_TRYBB
3 PsiBlast_PDB 91.6349%-112 - C9 -2IE8 - ? -
69 HHSearch 91.2343%-120 - C9 -4DG5 - PGK_STAAR -
5 PsiBlast_PDB 91.1845%-114 - C9 -3ZLB 7.7 PGK_STRP2
23 PsiBlast_CBE 90.9137%-123 - C9 -4NG4 6.6 PGK_COXBU
22 PsiBlast_CBE 90.3337%-125 - C9 -4NG4 6.8 PGK_COXBU
12 PsiBlast_PDB 89.2838%-102 - C9 -2XE6 5.7 PGK1_HUMAN
77 HHSearch 89.2339%-114 - C9 -4NG4 6.3 PGK_COXBU
48 PsiBlast_CBE 89.0038%-113 - C9 -1QPG 8.0 PGK_YEAST
75 HHSearch 88.9940%-107 - C9 -2WZB 8.3 PGK1_HUMAN
36 PsiBlast_CBE 88.9338%-101 - C9 -4O33 6.3 PGK1_HUMAN
47 PsiBlast_CBE 88.8938%-104 - C9 -1HDI 5.6 PGK1_PIG
14 PsiBlast_PDB 88.7938%-100 - C9 -2XE8 4.9 PGK1_HUMAN
18 PsiBlast_PDB 88.6538%-102 - C9 -1KF0 5.8 PGK1_PIG
53 PsiBlast_CBE 88.5237%-107 - C9 -2P9T 4.9 PGK2_MOUSE
8 PsiBlast_PDB 88.4537%-120 - C9 -4NG4 6.3 PGK_COXBU
38 PsiBlast_CBE 88.3638%-106 - C9 -1VJC 5.9 PGK1_PIG
13 PsiBlast_PDB 88.3038% -98 - C9 -2XE7 6.3 PGK1_HUMAN
19 PsiBlast_PDB 87.8838%-106 - C9 -2ZGV 5.2 PGK1_HUMAN
45 PsiBlast_CBE 87.8437%-101 - C9 -4O3F 6.9 PGK1_MOUSE
34 PsiBlast_CBE 87.8338%-103 - C9 -3C3A 3.9 PGK1_HUMAN
37 PsiBlast_CBE 87.7238%-106 - C9 -1VJD 6.0 PGK1_PIG
17 PsiBlast_PDB 87.6738% -99 - C9 -2Y3I 6.5 PGK1_HUMAN
30 PsiBlast_CBE 87.6338%-103 - C9 -3C3C 4.4 PGK1_HUMAN
52 PsiBlast_CBE 87.5337%-106 - C9 -2PAA 5.8 PGK2_MOUSE
27 PsiBlast_CBE 87.5138%-102 - C9 -4AXX 7.9 PGK1_HUMAN
16 PsiBlast_PDB 87.3938%-101 - C9 -3ZOZ 8.0 PGK1_HUMAN
43 PsiBlast_CBE 87.3038%-101 - C9 -2WZD 7.2 PGK1_HUMAN
15 PsiBlast_PDB 87.2038%-102 - C9 -2YBE 7.7 PGK1_HUMAN
20 PsiBlast_PDB 86.9938%-107 - C9 -3C39 5.4 PGK1_HUMAN
28 PsiBlast_CBE 86.8438%-100 - C9 -2Y3I 6.8 PGK1_HUMAN
31 PsiBlast_CBE 86.3438%-109 - C9 -3C3B 4.2 PGK1_HUMAN
39 PsiBlast_CBE 86.1038%-106 - C9 -2X15 8.0 PGK1_HUMAN
51 PsiBlast_CBE 85.9437%-111 - C9 -2PAA 3.8 PGK2_MOUSE
33 PsiBlast_CBE 85.8338%-105 - C9 -3C3A 5.5 PGK1_HUMAN
29 PsiBlast_CBE 85.5638%-105 - C9 -3C3C 4.8 PGK1_HUMAN
40 PsiBlast_CBE 85.5438%-105 - C9 -2X13 7.3 PGK1_HUMAN
44 PsiBlast_CBE 85.5238%-104 - C9 -2X14 8.5 PGK1_HUMAN
41 PsiBlast_CBE 85.3638%-105 - C9 -2WZC 8.1 PGK1_HUMAN
42 PsiBlast_CBE 85.2238%-105 - C9 -2WZB 8.3 PGK1_HUMAN
74 HHSearch 84.4433% -98 - C9 -2CUN 2.5 PGK_PYRHO
35 PsiBlast_CBE 83.9438%-105 - C9 -3C39 5.2 PGK1_HUMAN
57 PsiBlast_CBE 81.2632%-104 - C9 -2CUN 2.4 PGK_PYRHO
56 PsiBlast_CBE 80.7132%-102 - C9 -2CUN 2.8 PGK_PYRHO
83 HHSearch 78.6938% -99 - C9 -1FW8 2.7 PGK_YEAST
55 PsiBlast_CBE 77.0638%-103 - C9 -1FW8 2.7 PGK_YEAST
54 PsiBlast_CBE 65.4938% -10 - C9 -3PGK 1.8 PGK_YEAST
84 HHSearch 39.8242% -88 - C9 -1FW8 2.9 PGK_YEAST