@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1449c: (2016-05-01 )
MTTLEEISALTRPRHPDYWTEIDSAAVDTIRVLAADAVQKVGNGHPGTAMSLAPLAYTLFQRTMRHDPSDTHWLGRDRFVLSAGHSSLTLYIQLYLGGFGLELSDIESLRTWGSKTPGHPEFRHTPGVEITTGPLGQGLASAVGMAMASRYERGLFDPDAEPGASPFDHYIYVIASDGDIEEGVTSEASSLAAVQQLGNLIVFYDRNQISIEDDTNIALCEDTAARYRAYGWHVQEVEGGENVVGIEEAIANAQAVTDRPSFIALRTVIGYPAPNLMDTGKAHGAALGDDEVAAVKKIVGFDPDKTFQVREDVLTHTRGLVARGKQAHERWQLEFDAWARREPERKALLDRLLAQKLPDGWDADLPHWEPGSKALATRAASGAVLSALGPKLPELWGGSADLAGSNNTTIKGADSFGPPSISTKEYTAHWYGRTLHFGVREHAMGAILSGIVLHGPTRAYGGTFLQFSDYMRPAVRLAALMDIDTIYVWTHDSIGLGEDGPTHQPIEHLSALRAIPRLSVVRPADANETAYAWRTILARRNGSGPVGLILTRQGVPVLDGTDAEGVARGGYVLSDAGGLQPGEEPDVILIATGSEVQLAVAAQTLLADNDILARVVSMPCLEWFEAQPYEYRDAVLPPTVSARVAVEAGVAQCWHQLVGDTGEIVSIEHYGESADHKTLFREYGFTAEAVAAAAERALDN

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TPP_A_3(4C7X)
?
[Raw transfer]



DX5_A_13(4KXV)
TKT_HUMAN
[Raw transfer]
21 PsiBlast_CBE 97.61100% -89 - C1 -3RIM - TKT_MYCTU -
1 PsiBlast_PDB 97.43100% -90 - C1 -3RIM - TKT_MYCTU -
23 PsiBlast_CBE 97.41100% -89 - C1 -3RIM - TKT_MYCTU -
22 PsiBlast_CBE 97.41100% -87 - C1 -3RIM - TKT_MYCTU -
44 HHSearch 97.33100% -90 - C1 -3RIM - TKT_MYCTU -
42 HHSearch 80.4746% -83 - C1 -1GPU - TKT1_YEAST -
9 PsiBlast_PDB 80.0644% -83 - C1 -1TRK - TKT1_YEAST -
11 PsiBlast_PDB 79.7844% -81 - C1 -1GPU - TKT1_YEAST -
48 HHSearch 79.7547% -85 * C1 *3M49 - ? -
4 PsiBlast_PDB 79.6745% -83 - C1 -3M49 - ? -
31 PsiBlast_CBE 79.5344% -81 - C1 -1GPU - TKT1_YEAST -
7 PsiBlast_PDB 79.1344% -84 - C1 -1TKB - TKT1_YEAST -
3 PsiBlast_PDB 79.0245% -83 - C1 -3HYL - ? -
8 PsiBlast_PDB 78.9344% -81 - C1 -1TKC - TKT1_YEAST -
10 PsiBlast_PDB 78.8244% -82 - C1 -1NGS - TKT1_YEAST -
12 PsiBlast_PDB 78.5544% -82 - C1 -1AY0 - TKT1_YEAST -
6 PsiBlast_PDB 78.4244% -82 - C1 -1TKA - TKT1_YEAST -
30 PsiBlast_CBE 78.3944% -80 - C1 -1NGS - TKT1_YEAST -
26 PsiBlast_CBE 78.3144% -82 - C1 -1TKC - TKT1_YEAST -
41 HHSearch 78.3044% -79 - C1 -1ITZ - TKTC_MAIZE -
18 PsiBlast_PDB 75.4841% -80 - C1 -4C7X 5.9 ?