@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1496: (2016-05-02 )
MMAASHDDDTVDGLATAVRGGDRAALPRAITLVESTRPDHREQAQQLLLRLLPDSGNAHRVGITGVPGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTRTGGSILGDKTRMARLAVHPNAYIRPSPTSGTLGGVTRATRETVVLLEAAGFDVILIETVGVGQSEVAVANMVDTFVLLTLARTGDQLQGIKKGVLELADIVVVNKADGEHHKEARLAARELSAAIRLIYPREALWRPPVLTMSAVEGRGLAELWDTVERHRQVLTGAGEFDARRRDQQVDWTWQLVRDAVLDRVWSNPTVRKVRSELERRVRAGELTPALAAQQILEIANLTDR

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GDP_A_2(3P32)
Y1496_MYCTU
[Raw transfer]



GDP_A_2(3P32)
Y1496_MYCTU
[Raw transfer]



DGI_A_2(4GT1)
Y1496_MYCTU
[Raw transfer]



GDP_A_2(3MD0)
Y1496_MYCTU
[Raw transfer]



GDP_A_2(3NXS)
?
[Raw transfer]



GDP_B_4(3TK1)
?
[Raw transfer]



GNP_A_3(4JYB)
?
[Raw transfer]



GDP_B_6(2QM7)
?
[Raw transfer]



GDP_A_3(4LC1)
?
[Raw transfer]



GNP_B_4(4JYB)
?
[Raw transfer]



GDP_A_3(3TK1)
?
[Raw transfer]



GDP_A_5(2QM7)
?
[Raw transfer]



GDP_B_5(4LC1)
?
[Raw transfer]



GDP_C_9(2WWW)
MMAA_HUMAN
[Raw transfer]



GDP_D_11(2WWW)
MMAA_HUMAN
[Raw transfer]



GDP_B_7(2WWW)
MMAA_HUMAN
[Raw transfer]



GDP_A_6(2WWW)
MMAA_HUMAN
[Raw transfer]



GDP_A_6(2WWW)
MMAA_HUMAN
[Raw transfer]
115 HHSearch 98.23100%-125 - C6 -3P32 7.5 Y1496_MYCTU
2 PsiBlast_PDB 98.23100%-125 - C6 -3P32 7.5 Y1496_MYCTU
1 PsiBlast_PDB 97.61100%-126 - C6 -3MD0 6.9 Y1496_MYCTU
3 PsiBlast_PDB 97.53100%-125 - C6 -4GT1 8.0 Y1496_MYCTU
4 PsiBlast_PDB 93.2480%-116 - C6 -3NXS 7.0 ?
21 PsiBlast_CBE 92.4378%-115 - C6 -3TK1 6.7 ?
5 PsiBlast_PDB 89.1678%-127 - C6 -3TK1 4.8 ?
22 PsiBlast_CBE 83.2358%-103 - C6 -4LC1 5.6 ?
117 HHSearch 82.6957% -98 * C6 *2QM8 - ? -
25 PsiBlast_CBE 82.5058%-108 - C6 -2QM7 6.1 ?
9 PsiBlast_PDB 81.8558% -98 - C6 -4LC1 6.0 ?
6 PsiBlast_PDB 81.4458%-100 - C6 -2QM7 5.9 ?
7 PsiBlast_PDB 81.4358% -90 - C6 -4JYB 6.6 ?
10 PsiBlast_PDB 81.4158% -97 - C6 -2QM8 - ? -
23 PsiBlast_CBE 80.8258% -98 - C6 -4JYC - ? -
11 PsiBlast_PDB 80.1550%-128 - C6 -2WWW 5.9 MMAA_HUMAN
24 PsiBlast_CBE 79.6058% -91 - C6 -4JYB 5.4 ?
8 PsiBlast_PDB 79.4258% -95 - C6 -4JYC - ? -
116 HHSearch 79.3750%-121 - C6 -2WWW 5.9 MMAA_HUMAN
28 PsiBlast_CBE 79.0450%-128 - C6 -2WWW 5.8 MMAA_HUMAN
27 PsiBlast_CBE 78.7750%-126 - C6 -2WWW 6.2 MMAA_HUMAN
26 PsiBlast_CBE 78.5650%-116 - C6 -2WWW 5.9 MMAA_HUMAN