@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1537: (2016-05-02 )
MESRWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARAYGARSAMPMHQARRLIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVETFCERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLWGIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAKQISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRSATMPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVGFSGLSDIRQESLFADSDLTQETAAAHYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSARTFPVDTGDISNASPLDSLDWPDYIGQLSVEGSAGASAPTVDDVGDR

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

1FZ_A_10(4IR1)
DPO4_ECOLI
[Raw transfer]




1FZ_A_8(4R8U)
DPO4_ECOLI
[Raw transfer]




1FZ_B_9(4R8U)
?
[Raw transfer]




0KX_A_7(4Q43)
DPO4_ECOLI
[Raw transfer]




DZ4_F_7(4IRD)
DPO4_ECOLI
[Raw transfer]




XG4_A_10(4IR9)
DPO4_ECOLI
[Raw transfer]




0KX_A_10(4IRC)
DPO4_ECOLI
[Raw transfer]




1FZ_A_7(4Q44)
DPO4_ECOLI
[Raw transfer]




XG4_F_7(4IR9)
DPO4_ECOLI
[Raw transfer]




1FZ_A_10(4Q45)
DPO4_ECOLI
[Raw transfer]




1FZ_F_7(4Q45)
DPO4_ECOLI
[Raw transfer]




DCP_A_9(4IRK)
DPO4_ECOLI
[Raw transfer]




1FZ_F_7(4IR1)
DPO4_ECOLI
[Raw transfer]




1FZ_F_10(4Q44)
DPO4_ECOLI
[Raw transfer]




DCP_B_7(4IRK)
DPO4_ECOLI
[Raw transfer]




1FZ_F_7(4Q45)
DPO4_ECOLI
[Raw transfer]




0KX_F_10(4Q43)
DPO4_ECOLI
[Raw transfer]




DZ4_A_10(4IRD)
DPO4_ECOLI
[Raw transfer]




0KX_F_7(4IRC)
DPO4_ECOLI
[Raw transfer]




TTP_A_9(2OH2)
POLK_HUMAN
[Raw transfer]




DTP_P_5(4ECQ)
POLH_HUMAN
[Raw transfer]




DGT_A_7(2W7O)
POLK_HUMAN
[Raw transfer]




DTP_A_4(3MFI)
POLH_YEAST
[Raw transfer]




POP_A_9(2AGO)
DPO4_SULSO
[Raw transfer]




TTP_T_9(4TQR)
DPO4_SULSO
[Raw transfer]




65 Fugue 93.6127%-100 - C2 -2OH2 4.9 POLK_HUMAN
66 Fugue 92.4627% -95 - C2 -2W7O 4.4 POLK_HUMAN
39 HHSearch 89.7129% -96 - C2 -3GQC - REV1_HUMAN -
49 HHSearch 88.5328% -90 - C2 -4ECQ 5.5 POLH_HUMAN
42 HHSearch 87.7731% -96 - C2 -4Q45 4.7 DPO4_ECOLI
33 PsiBlast_CBE 83.7232% -88 - C2 -4IRK 3.9 DPO4_ECOLI
41 HHSearch 83.3628%-100 - C2 -4TQR 2.6 DPO4_SULSO
2 PsiBlast_PDB 83.3428% -93 - C2 -4G3I - DPO4_SULSO -
9 PsiBlast_PDB 83.3128% -94 - C2 -2UVU - DPO4_SULSO -
46 HHSearch 83.2925% -99 - C2 -3OSN - POLI_HUMAN -
15 PsiBlast_PDB 83.1828% -93 - C2 -3T5H - DPO4_SULSO -
4 PsiBlast_PDB 82.9928% -94 - C2 -2ASJ - DPO4_SULSO -
34 PsiBlast_CBE 82.9232% -87 - C2 -4IRD 4.7 DPO4_ECOLI
21 PsiBlast_CBE 82.8631% -90 - C2 -4R8U 4.6 DPO4_ECOLI
20 PsiBlast_PDB 82.8628% -96 - C2 -4FBU - DPO4_SULSO -
18 PsiBlast_PDB 82.8428% -92 - C2 -3T5L - DPO4_SULSO -
5 PsiBlast_PDB 82.8028% -96 - C2 -2ASL - DPO4_SULSO -
32 PsiBlast_CBE 82.6332% -91 - C2 -4IRK 3.2 DPO4_ECOLI
31 PsiBlast_CBE 82.5032% -92 - C2 -4Q44 4.6 DPO4_ECOLI
37 PsiBlast_CBE 82.3932% -89 - C2 -4IRC 4.4 DPO4_ECOLI
29 PsiBlast_CBE 82.3232% -91 - C2 -4Q45 4.6 DPO4_ECOLI
36 PsiBlast_CBE 82.2932% -87 - C2 -4IRC 4.3 DPO4_ECOLI
30 PsiBlast_CBE 82.2432% -88 - C2 -4Q44 3.7 DPO4_ECOLI
25 PsiBlast_CBE 82.2131% -89 - C2 -4IR9 5.9 DPO4_ECOLI
26 PsiBlast_CBE 82.2031% -91 - C2 -4IR1 5.3 DPO4_ECOLI
27 PsiBlast_CBE 81.8931% -90 - C2 -4IR1 4.7 DPO4_ECOLI
24 PsiBlast_CBE 81.8731% -89 - C2 -4IR9 4.9 DPO4_ECOLI
22 PsiBlast_CBE 81.8731% -89 - C2 -4Q43 5.4 DPO4_ECOLI
35 PsiBlast_CBE 81.7632% -88 - C2 -4IRD 4.5 DPO4_ECOLI
23 PsiBlast_CBE 81.5631% -89 - C2 -4Q43 4.9 DPO4_ECOLI
38 PsiBlast_CBE 81.4131% -90 - C2 -4R8U 5.0 ?
28 PsiBlast_CBE 81.3532% -87 - C2 -4Q45 4.7 DPO4_ECOLI