@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1544: (2016-05-02 )
MSLPKPNNQTTVVITGASSGIGVELARGLAGRGFPLMLVARRRERLDELADQLRQEHCVGVEVLPLDLADTQARAQLADRLRSDAIAGLCNSAGFGTSGRFWELPFARESEEVVLNALALMELTHAALPGMVKRGAGAVLNIASIAGFQPIPYMAVYSATKAFVLTFSEAVQEELHGTGVSVTALCPGPVPTEWAEIASAERFSIPLAQVSPHDVAEAAIAGMLSGKRTVVPGIVPKFVSTSGRFAPRSLLLPAIRIGNRLRGGPSR

Atome Classification :

(52 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_C_9(2JAP)
?
[Raw transfer]




NDP_A_5(2JAP)
?
[Raw transfer]




NDP_D_11(2JAP)
?
[Raw transfer]




NDP_B_7(2JAP)
?
[Raw transfer]




NAP_A_5(3RKU)
YM71_YEAST
[Raw transfer]




NAP_B_6(3RKU)
YM71_YEAST
[Raw transfer]




NAP_C_7(3RKU)
YM71_YEAST
[Raw transfer]




NAD_B_10(3VDQ)
?
[Raw transfer]




NAP_D_8(3RKU)
YM71_YEAST
[Raw transfer]




NAD_A_7(3VDR)
?
[Raw transfer]




NAD_A_2(3W8D)
?
[Raw transfer]




NAP_A_5(3P19)
?
[Raw transfer]




NAP_B_6(3P19)
?
[Raw transfer]




NAP_C_7(3P19)
?
[Raw transfer]




NAD_A_2(3W8E)
?
[Raw transfer]




NAD_B_13(3VDR)
?
[Raw transfer]




NAD_D_10(2ZTV)
?
[Raw transfer]




NAD_C_9(2ZTV)
?
[Raw transfer]




NAP_A_3(3UF0)
?
[Raw transfer]




NAP_D_8(3P19)
?
[Raw transfer]




NAD_A_7(3VDQ)
?
[Raw transfer]




NAD_C_15(3VDQ)
?
[Raw transfer]




NAD_D_18(3VDQ)
?
[Raw transfer]




NAD_B_7(2ZTV)
?
[Raw transfer]




NAD_D_22(3VDR)
?
[Raw transfer]




FMT_A_11(1W4Z)
ACT3_STRCO
[Raw transfer]




FMT_A_4(3QRW)
ACT3_STRCO
[Raw transfer]




3HR_A_3(3W8E)
?
[Raw transfer]




3HL_A_6(2ZTL)
?
[Raw transfer]




MLA_A_3(3W8F)
?
[Raw transfer]




3HL_C_12(2ZTL)
?
[Raw transfer]




3HL_D_14(2ZTL)
?
[Raw transfer]




3HL_B_9(2ZTL)
?
[Raw transfer]




3HR_C_19(3VDR)
?
[Raw transfer]




3HR_D_24(3VDR)
?
[Raw transfer]




28 PsiBlast_CBE 82.8845%-116 - C1 -4BMV - ? -
27 PsiBlast_CBE 82.3645%-115 - C1 -4BMV - ? -
23 PsiBlast_CBE 82.1345%-114 - C1 -4BMV - ? -
25 PsiBlast_CBE 82.1245%-114 - C1 -4BMV - ? -
24 PsiBlast_CBE 81.7845%-114 - C1 -4BMV - ? -
26 PsiBlast_CBE 81.6245%-115 - C1 -4BMV - ? -
29 PsiBlast_CBE 81.3845%-115 - C1 -4BMV - ? -
1 PsiBlast_PDB 81.2545%-114 - C1 -4BMV - ? -
21 PsiBlast_CBE 80.7345%-115 - C1 -4BMV - ? -
22 PsiBlast_CBE 79.9445%-114 - C1 -4BMV - ? -
59 PsiBlast_CBE 79.3132%-109 - C1 -3RI3 - ACT3_STRCO -
69 PsiBlast_CBE 79.2731%-105 - C1 -4DBZ - ACT3_STRCO -
55 PsiBlast_CBE 78.7331%-104 - C1 -4DC1 - ACT3_STRCO -
60 PsiBlast_CBE 78.3232%-104 - C1 -3QRW - ACT3_STRCO -
119 HHSearch 78.2030% -97 - C1 -3AI3 - ? -
58 PsiBlast_CBE 76.7731%-103 - C1 -2RH4 - ACT3_STRCO -
18 PsiBlast_PDB 76.5432%-104 - C1 -3QRW 3.0 ACT3_STRCO
17 PsiBlast_PDB 76.4332%-105 - C1 -3CSD - ACT3_STRCO -
19 PsiBlast_PDB 75.8932%-106 - C1 -3RI3 - ACT3_STRCO -
16 PsiBlast_PDB 75.8231%-103 - C1 -2RHC - ACT3_STRCO -
14 PsiBlast_PDB 73.1331%-100 - C1 -1W4Z 3.0 ACT3_STRCO
71 PsiBlast_CBE 70.0336% -97 - C1 -2JAP 11.6 ?
51 PsiBlast_CBE 69.7232%-112 - C1 -3RKU 12.7 YM71_YEAST
52 PsiBlast_CBE 69.5732%-112 - C1 -3RKU 12.7 YM71_YEAST
73 PsiBlast_CBE 69.2936% -98 - C1 -2JAP 11.0 ?
10 PsiBlast_PDB 68.7632%-111 - C1 -3RKU 12.6 YM71_YEAST
72 PsiBlast_CBE 68.5436% -97 - C1 -2JAP 11.2 ?
74 PsiBlast_CBE 68.3736% -98 - C1 -2JAP 11.2 ?
53 PsiBlast_CBE 67.9032%-111 - C1 -3RKU 12.7 YM71_YEAST
83 PsiBlast_CBE 66.1731%-114 - C1 -2ZTL 3.7 ?
84 PsiBlast_CBE 64.9431%-112 - C1 -2ZTL 3.8 ?
78 PsiBlast_CBE 64.5831%-110 - C1 -2ZTV 7.2 ?
81 PsiBlast_CBE 63.5131%-111 - C1 -2ZTL 2.7 ?
77 PsiBlast_CBE 63.3131%-114 - C1 -2ZTV 7.5 ?
82 PsiBlast_CBE 62.9231%-110 - C1 -2ZTL 3.8 ?
76 PsiBlast_CBE 62.5833%-104 - C1 -3UF0 7.0 ?
96 PsiBlast_CBE 62.2131%-104 - C1 -3VDQ 8.5 ?
90 PsiBlast_CBE 61.9131%-103 - C1 -3W8D 9.0 ?
89 PsiBlast_CBE 61.5131%-100 - C1 -3W8E 8.7 ?
79 PsiBlast_CBE 61.3031%-113 - C1 -2ZTV 6.8 ?
97 PsiBlast_CBE 61.0331%-100 - C1 -3VDQ 8.9 ?
88 PsiBlast_CBE 60.6931% -99 - C1 -3W8F 3.5 ?
91 PsiBlast_CBE 60.6431%-102 - C1 -3VDR 8.4 ?
95 PsiBlast_CBE 59.3631% -99 - C1 -3VDQ 8.0 ?
98 PsiBlast_CBE 59.3431% -99 - C1 -3VDQ 7.1 ?
93 PsiBlast_CBE 58.5031% -98 - C1 -3VDR 8.9 ?
94 PsiBlast_CBE 58.4531% -96 - C1 -3VDR 8.2 ?
92 PsiBlast_CBE 57.5631% -99 - C1 -3VDR 2.5 ?
47 PsiBlast_CBE 57.0537%-107 - C1 -3P19 11.4 ?
48 PsiBlast_CBE 55.6037%-107 - C1 -3P19 9.4 ?
49 PsiBlast_CBE 55.4537%-109 - C1 -3P19 9.4 ?
8 PsiBlast_PDB 54.5437%-105 - C1 -3P19 11.4 ?