@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1552: (2016-05-02 )
MTAQHNIVVIGGGGAGLRAAIAIAETNPHLDVAIVSKVYPMRSHTVSAEGGAAAVTGDDDSLDEHAHDTVSGGDWLCDQDAVEAFVAEAPKELVQLEHWGCPWSRKPDGRVAVRPFGGMKKLRTWFAADKTGFHLLHTLFQRLLTYSDVMRYDEWFATTLLVDDGRVCGLVAIELATGRIETILADAVILCTGGCGRVFPFTTNANIKTGDGMALAFRAGAPLKDMEFVQYHPTGLPFTGILITEAARAEGGWLLNKDGYRYLQDYDLGKPTPEPRLRSMELGPRDRLSQAFVHEHNKGRTVDTPYGPVVYLDLRHLGADLIDAKLPFVRELCRDYQHIDPVVELVPVRPVVHYMMGGVHTDINGATTLPGLYAAGETACVSINGANRLGSNSLPELLVFGARAGRAAADYAARHQKSDRGPSSAVRAQARTEALRLERELSRHGQGGERIADIRADMQATLESAAGIYRDGPTLTKAVEEIRVLQERFATAGIDDHSRTFNTELTALLELSGMLDVALAIVESGLRREESRGAHQRTDFPNRDDEHFLAHTLVHRESDGTLRVGYLPVTITRWPPGERVYGR

Atome Classification :

(49 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_8(1NEN)
SDHA_ECOLI
[Raw transfer]




FAD_A_8(1NEK)
SDHA_ECOLI
[Raw transfer]




FAD_A_6(1YQ3)
SDHA_CHICK
[Raw transfer]




FAD_A_5(3AEE)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE5)
SDHA_PIG
[Raw transfer]




FAD_A_5(3SFE)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AEB)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AEC)
SDHA_PIG
[Raw transfer]




FAD_A_5(3ABV)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE9)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE8)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AEF)
SDHA_PIG
[Raw transfer]




FAD_A_5(1ZP0)
SDHA_PIG
[Raw transfer]




FAD_A_6(2ACZ)
SDHA_ECOLI
[Raw transfer]




FAD_A_6(1YQ4)
SDHA_CHICK
[Raw transfer]




FAD_A_5(3AE6)
SDHA_PIG
[Raw transfer]




FAD_A_5(3SFD)
SDHA_PIG
[Raw transfer]




FAD_A_5(4YTP)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE3)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE7)
SDHA_PIG
[Raw transfer]




FAD_A_6(2H89)
SDHA_CHICK
[Raw transfer]




FAD_A_5(3AED)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE1)
SDHA_PIG
[Raw transfer]




FAD_A_5(4YXD)
?
[Raw transfer]




FAD_A_5(1ZOY)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AEA)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE2)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AEG)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE4)
SDHA_PIG
[Raw transfer]




MEZ_A_8(1Y0P)
FRDA_SHEFR
[Raw transfer]




3NP_A_10(1ZP0)
SDHA_PIG
[Raw transfer]




3NP_A_11(1YQ4)
SDHA_CHICK
[Raw transfer]




102 Fugue 98.4954% -85 - C1 -1L0V - FRDA_ECOLI -
113 HHSearch 97.3655% -79 - C1 -1KF6 - FRDA_ECOLI -
8 PsiBlast_PDB 93.3754% -83 - C1 -3P4S - FRDA_ECOLI -
3 PsiBlast_PDB 93.2454% -80 - C1 -1L0V - FRDA_ECOLI -
30 PsiBlast_CBE 93.1554% -81 - C1 -3P4P - FRDA_ECOLI -
7 PsiBlast_PDB 92.7154% -80 - C1 -3P4Q - FRDA_ECOLI -
5 PsiBlast_PDB 92.6254% -80 - C1 -3P4R - FRDA_ECOLI -
1 PsiBlast_PDB 92.4954% -79 - C1 -1KF6 - FRDA_ECOLI -
22 PsiBlast_CBE 92.4854% -79 - C1 -1KFY - FRDA_ECOLI -
6 PsiBlast_PDB 92.4254% -78 - C1 -3P4P - FRDA_ECOLI -
28 PsiBlast_CBE 92.3454% -79 - C1 -3P4R - FRDA_ECOLI -
9 PsiBlast_PDB 92.2854% -78 - C1 -4KX6 - FRDA_ECOLI -
27 PsiBlast_CBE 91.9854% -78 - C1 -3P4S - FRDA_ECOLI -
2 PsiBlast_PDB 91.9254% -78 - C1 -1KFY - FRDA_ECOLI -
4 PsiBlast_PDB 91.7854% -79 - C1 -2B76 - FRDA_ECOLI -
29 PsiBlast_CBE 91.7254% -81 - C1 -3P4Q - FRDA_ECOLI -
26 PsiBlast_CBE 91.4954% -79 - C1 -4KX6 - FRDA_ECOLI -
23 PsiBlast_CBE 91.3154% -78 - C1 -1KF6 - FRDA_ECOLI -
115 HHSearch 91.0243% -74 - C1 -2WDQ - SDHA_ECOLI -
21 PsiBlast_CBE 90.5354% -77 - C1 -1L0V - FRDA_ECOLI -
86 PsiBlast_CBE 85.5335% -66 - C1 -1YQ4 9.9 SDHA_CHICK
81 PsiBlast_CBE 85.3135% -70 - C1 -2H89 10.1 SDHA_CHICK
87 PsiBlast_CBE 85.0035% -67 - C1 -1YQ3 10.7 SDHA_CHICK
11 PsiBlast_PDB 83.7940% -67 - C1 -1NEN 10.2 SDHA_ECOLI
10 PsiBlast_PDB 83.2840% -65 - C1 -1NEK 9.9 SDHA_ECOLI
12 PsiBlast_PDB 82.7640% -67 - C1 -2ACZ 10.0 SDHA_ECOLI
72 PsiBlast_CBE 82.7038% -67 - C1 -3AE4 9.8 SDHA_PIG
73 PsiBlast_CBE 82.6838% -70 - C1 -3AE3 9.6 SDHA_PIG
75 PsiBlast_CBE 82.3438% -70 - C1 -3AE1 10.9 SDHA_PIG
60 PsiBlast_CBE 82.3038% -70 - C1 -3AEG 11.5 SDHA_PIG
65 PsiBlast_CBE 82.2538% -69 - C1 -3AEB 10.9 SDHA_PIG
70 PsiBlast_CBE 82.2438% -70 - C1 -3AE6 10.4 SDHA_PIG
71 PsiBlast_CBE 82.2138% -68 - C1 -3AE5 9.6 SDHA_PIG
64 PsiBlast_CBE 82.2038% -70 - C1 -3AEC 8.6 SDHA_PIG
56 PsiBlast_CBE 82.1538% -67 - C1 -4YXD 11.1 ?
77 PsiBlast_CBE 82.1038% -67 - C1 -1ZP0 10.5 SDHA_PIG
67 PsiBlast_CBE 82.1038% -69 - C1 -3AE9 10.8 SDHA_PIG
78 PsiBlast_CBE 82.0738% -67 - C1 -1ZOY 10.0 SDHA_PIG
74 PsiBlast_CBE 82.0338% -70 - C1 -3AE2 11.3 SDHA_PIG
63 PsiBlast_CBE 81.9338% -70 - C1 -3AED 9.7 SDHA_PIG
58 PsiBlast_CBE 81.8838% -68 - C1 -3SFE 11.3 SDHA_PIG
66 PsiBlast_CBE 81.8438% -71 - C1 -3AEA 10.3 SDHA_PIG
57 PsiBlast_CBE 81.7938% -67 - C1 -4YTP 11.8 SDHA_PIG
59 PsiBlast_CBE 81.6938% -68 - C1 -3SFD 10.8 SDHA_PIG
62 PsiBlast_CBE 81.6438% -67 - C1 -3AEE 10.1 SDHA_PIG
76 PsiBlast_CBE 81.6338% -71 - C1 -3ABV 10.6 SDHA_PIG
68 PsiBlast_CBE 81.6338% -72 - C1 -3AE8 9.5 SDHA_PIG
61 PsiBlast_CBE 81.3238% -69 - C1 -3AEF 10.0 SDHA_PIG
69 PsiBlast_CBE 81.2138% -68 - C1 -3AE7 9.6 SDHA_PIG