@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1562c: (2016-05-03 )
MPEFRVWAPKPALVRLDVNGAVHAMTRSADGWWHTTVAAPADARYGYLLDDDPTVLPDPRSARQPDGVHARSQRWEPPGQFGAARTDTGWPGRSVEGAVIYELHIGTFTTAGTFDAAIEKLDYLVDLGIDFVELMPVNSFAGTRGWGYDGVLWYSVHEPYGGPDGLVRFIDACHARRLGVLIDAVFNHLGPSGNYLPRFGPYLSSASNPWGDGINIAGADSDEVRHYIIDCALRWMRDFHADGLRLDAVHALVDTTAVHVLEELANATRWLSGQLGRPLSLIAETDRNDPRLITRPSHGGYGITAQWNDDIHHAIHTAVSGERQGYYADFGSLATLAYTLRNGYFHAGTYSSFRRRRHGRALDTSAIPATRLLAYTCTHDQVGNRALGDRPSQYLTGGQLAIKAALTLGSPYTAMLFMGEEWGASSPFQFFCSHPEPELAHSTVAGRKEEFAEHGWAADDIPDPQDPQTFQRCKLNWAEAGSGEHARLHRFYRDLIALRHNEADLADPWLDHLMVDYDEQQRWVVMRRGQLMIACNLGAEPTCVPVSGELVLAWESPIIGDNSTELAAYSLAILRAAEPA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TRE_A_4(2BHY)
TREZ_DEIRA
[Raw transfer]



BTB_A_12(3M07)
?
[Raw transfer]



SUGAR_A_2(3VGF)
TREZ_SULSF
[Raw transfer]
-
BTB_A_12(3M07)
?
[Raw transfer]



SUGAR_A_2(3VGF)
TREZ_SULSF
[Raw transfer]
-
MAL_A_8(2BHZ)
TREZ_DEIRA
[Raw transfer]



SUGAR_A_2(3VGH)
TREZ_SULSF
[Raw transfer]
-
GLC_A_4(2BY3)
TREZ_DEIRA
[Raw transfer]



GLC_A_4(2BXZ)
TREZ_DEIRA
[Raw transfer]



MAL_A_3(2BHZ)
TREZ_DEIRA
[Raw transfer]



GOL_A_5(3VGB)
TREZ_SULSF
[Raw transfer]



GLC_A_4(2BY1)
TREZ_DEIRA
[Raw transfer]



GLC_A_4(2BY0)
TREZ_DEIRA
[Raw transfer]



SUGAR_A_2(3VGG)
TREZ_SULSF
[Raw transfer]
-
GLC_A_4(2BY2)
TREZ_DEIRA
[Raw transfer]



BME_A_9(2BHZ)
TREZ_DEIRA
[Raw transfer]



GLC_A_4(2BXY)
TREZ_DEIRA
[Raw transfer]



GOL_A_9(3VGE)
TREZ_SULSF
[Raw transfer]



TRE_A_6(2BHY)
TREZ_DEIRA
[Raw transfer]
78 HHSearch 90.5239% -91 - C1 -2BHU - TREZ_DEIRA -
9 PsiBlast_PDB 89.3438% -86 - C1 -3M07 2.5 ?
76 HHSearch 87.5339% -90 - C1 -3VGF 6.0 TREZ_SULSF
77 HHSearch 87.2839% -85 - C1 -3M07 2.5 ?
4 PsiBlast_PDB 86.3937% -89 - C1 -3VGG 7.2 TREZ_SULSF
2 PsiBlast_PDB 86.3438% -90 - C1 -3VGB 2.3 TREZ_SULSF
12 PsiBlast_PDB 86.3039% -85 - C1 -2BHZ 3.8 TREZ_DEIRA
10 PsiBlast_PDB 86.2040% -86 * C1 *2BHU - TREZ_DEIRA -
8 PsiBlast_PDB 86.0137% -91 - C1 -3VGF 6.1 TREZ_SULSF
5 PsiBlast_PDB 85.7637% -91 - C1 -3VGH 8.4 TREZ_SULSF
7 PsiBlast_PDB 85.4137% -91 - C1 -3VGE 3.4 TREZ_SULSF
13 PsiBlast_PDB 85.0339% -85 - C1 -2BXY 2.3 TREZ_DEIRA
6 PsiBlast_PDB 84.9937% -89 - C1 -3VGD - TREZ_SULSF -
17 PsiBlast_PDB 84.9439% -86 - C1 -2BY2 2.4 TREZ_DEIRA
18 PsiBlast_PDB 84.9139% -86 - C1 -2BY3 2.3 TREZ_DEIRA
14 PsiBlast_PDB 84.6739% -86 - C1 -2BXZ 2.3 TREZ_DEIRA
11 PsiBlast_PDB 84.6139% -86 - C1 -2BHY 3.7 TREZ_DEIRA
15 PsiBlast_PDB 84.6039% -86 - C1 -2BY0 2.4 TREZ_DEIRA
66 Fugue 84.5339% -83 - C1 -1EH9 - TREZ_SULSF -
16 PsiBlast_PDB 83.9439% -86 - C1 -2BY1 2.4 TREZ_DEIRA