Atome 2 Filter

@TOME V2.3
(Nov 2016)

Ref. - - Doc.

Global output mode :

Sort entries by :

Sequence Color type :

Show alignment :

Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling

Templates Information:

Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]

Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1596: (2016-05-03 )
MGLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAETGVDYLAVGALTHSVRVLDIGLDM

Atome Classification :

(43 SA)

Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)

(Atome)

(Ident)

(Tito)

(Num)

(pKd)

(Uniprot)

NCN_I_9(2B7Q)
NADC_HELPY
[Raw transfer]

NCN_A_3(4I9A)
?
[Raw transfer]

NCN_G_7(2B7Q)
NADC_HELPY
[Raw transfer]

NCN_B_4(4I9A)
?
[Raw transfer]

NCN_K_11(2B7Q)
NADC_HELPY
[Raw transfer]

NTM_M_13(2B7N)
NADC_HELPY
[Raw transfer]

NTM_M_13(2B7N)
NADC_HELPY
[Raw transfer]

PHT_Q_17(2B7P)
NADC_HELPY
[Raw transfer]

PHT_O_15(2B7P)
NADC_HELPY
[Raw transfer]

NTM_O_15(2B7N)
NADC_HELPY
[Raw transfer]

NTM_B_4(1QAP)
NADC_SALTY
[Raw transfer]

NTM_A_3(1QAP)
NADC_SALTY
[Raw transfer]

NTM_A_3(1QAP)
NADC_SALTY
[Raw transfer]

NTM_Q_17(2B7N)
NADC_HELPY
[Raw transfer]

PHT_M_13(2B7P)
NADC_HELPY
[Raw transfer]

EDO_A_5(3L0G)
?
[Raw transfer]

EDO_C_9(3L0G)
?
[Raw transfer]

EDO_D_11(3L0G)
?
[Raw transfer]

EDO_A_5(3L0G)
?
[Raw transfer]

EDO_B_7(3L0G)
?
[Raw transfer]

CHAIN_D_3(3GNN)
?
[Raw transfer]
-

CHAIN_D_3(3GNN)
?
[Raw transfer]
-

CHAIN_E_4(3GNN)
?
[Raw transfer]
-

22

PsiBlast_CBE

99.82

100%

- C7 -

-

-

33

PsiBlast_CBE

99.66

100%

- C7 -

-

-

32

PsiBlast_CBE

99.57

100%

- C7 -

-

-

31

PsiBlast_CBE

99.53

100%

- C7 -

-

-

1

PsiBlast_PDB

99.49

100%

- C7 -

-

-

34

PsiBlast_CBE

99.44

100%

- C7 -

-

-

25

PsiBlast_CBE

99.43

100%

- C7 -

-

-

24

PsiBlast_CBE

99.43

100%

- C7 -

-

-

35

PsiBlast_CBE

99.42

100%

- C7 -

-

-

23

PsiBlast_CBE

99.38

100%

- C7 -

-

-

27

PsiBlast_CBE

99.29

100%

- C7 -

-

-

21

PsiBlast_CBE

99.26

100%

- C7 -

-

-

30

PsiBlast_CBE

99.16

100%

- C7 -

-

-

2

PsiBlast_PDB

99.07

100%

- C7 -

-

-

40

PsiBlast_CBE

99.05

100%

- C7 -

-

-

29

PsiBlast_CBE

99.03

100%

- C7 -

-

-

4

PsiBlast_PDB

99.03

100%

- C7 -

-

-

28

PsiBlast_CBE

99.01

100%

- C7 -

-

-

3

PsiBlast_PDB

99.01

100%

- C7 -

-

-

39

PsiBlast_CBE

98.90

100%

- C7 -

-

-

102

HHSearch

78.29

42%

- C7 -

6

PsiBlast_PDB

77.63

42%

- C7 -

41

PsiBlast_CBE

77.45

42%

- C7 -

103

HHSearch

76.13

36%

- C7 -

?

12

PsiBlast_PDB

75.77

37%

- C7 -

?

104

HHSearch

75.70

36%

- C7 -

44

PsiBlast_CBE

75.31

35%

- C7 -

48

PsiBlast_CBE

75.09

37%

- C7 -

?

42

PsiBlast_CBE

75.08

35%

- C7 -

8

PsiBlast_PDB

75.03

35%

- C7 -

49

PsiBlast_CBE

75.00

37%

- C7 -

?

50

PsiBlast_CBE

74.48

37%

- C7 -

?

46

PsiBlast_CBE

74.43

35%

- C7 -

47

PsiBlast_CBE

74.31

35%

- C7 -

9

PsiBlast_PDB

74.13

35%

- C7 -

101

HHSearch

73.94

40%

- C7 -

?

43

PsiBlast_CBE

73.65

35%

- C7 -

45

PsiBlast_CBE

73.64

35%

- C7 -

10

PsiBlast_PDB

73.43

35%

- C7 -

13

PsiBlast_PDB

70.89

41%

- C7 -

?

14

PsiBlast_PDB

70.35

31%

- C7 -

?

52

PsiBlast_CBE

69.83

31%

- C7 -

?

51

PsiBlast_CBE

66.55

41%

- C7 -

?