@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1605: (2016-05-03 )
MYADRDLPGAGGLAVRVIPCLDVDDGRVVKGVNFENLRDAGDPVELAAVYDAEGADELTFLDVTASSSGRATMLEVVRRTAEQVFIPLTVGGGVRTVADVDSLLRAGADKVAVNTAAIACPDLLADMARQFGSQCIVLSVDARTVPVGSAPTPSGWEVTTHGGRRGTGMDAVQWAARGADLGVGEILLNSMDADGTKAGFDLALLRAVRAAVTVPVIASGGAGAVEHFAPAVAAGADAVLAASVFHFRELTIGQVKAALAAEGITVR

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_6(1H5Y)
HIS6_PYRAE
[Raw transfer]




GOL_A_5(1H5Y)
HIS6_PYRAE
[Raw transfer]




GOL_A_6(1H5Y)
HIS6_PYRAE
[Raw transfer]




GOL_B_10(1H5Y)
HIS6_PYRAE
[Raw transfer]




GOL_B_9(1H5Y)
HIS6_PYRAE
[Raw transfer]




POP_A_9(1OX4)
HIS5_YEAST
[Raw transfer]




1PR_A_5(1OX5)
HIS5_YEAST
[Raw transfer]




1PR_B_4(1OX5)
HIS5_YEAST
[Raw transfer]




0VR_D_2(4EWN)
HIS6_THEMA
[Raw transfer]




POP_B_10(1OX4)
HIS5_YEAST
[Raw transfer]




94 HHSearch 93.5870%-118 - C3 -4EVZ - ? -
21 PsiBlast_CBE 93.5067%-120 - C3 -4EVZ - ? -
1 PsiBlast_PDB 92.3167%-116 - C3 -4EVZ - ? -
3 PsiBlast_PDB 89.7756%-117 - C3 -1H5Y 3.4 HIS6_PYRAE
2 PsiBlast_PDB 89.3759%-116 - C3 -1KA9 - HIS6_THET8 -
22 PsiBlast_CBE 89.2856%-115 - C3 -1H5Y 3.7 HIS6_PYRAE
89 HHSearch 89.2455%-117 - C3 -1H5Y 2.7 HIS6_PYRAE
92 HHSearch 88.6053%-118 - C3 -1THF - HIS6_THEMA -
6 PsiBlast_PDB 88.2651%-120 - C3 -2A0N - HIS6_THEMA -
25 PsiBlast_CBE 87.9351%-121 - C3 -2WJZ - HIS6_THEMA -
9 PsiBlast_PDB 87.5950%-124 - C3 -4EWN 4.6 HIS6_THEMA
5 PsiBlast_PDB 87.5351%-120 - C3 -1VH7 - HIS6_THEMA -
7 PsiBlast_PDB 87.3751%-118 - C3 -1THF - HIS6_THEMA -
4 PsiBlast_PDB 86.7751%-120 - C3 -2WJZ - HIS6_THEMA -
31 PsiBlast_CBE 86.3446%-123 - C3 -3IIV - ? -
13 PsiBlast_PDB 85.8646%-119 - C3 -3IIV - ? -
10 PsiBlast_PDB 85.6448%-116 - C3 -2RKX - ? -
11 PsiBlast_PDB 85.5447%-118 - C3 -3IIO - ? -
78 Fugue 85.3750%-116 - C3 -1THF - HIS6_THEMA -
12 PsiBlast_PDB 85.1747%-118 - C3 -3IIP - ? -
14 PsiBlast_PDB 80.2136%-124 - C3 -1OX4 3.1 HIS5_YEAST
32 PsiBlast_CBE 56.5136% -45 - C3 -1OX5 1.6 HIS5_YEAST
16 PsiBlast_PDB 56.3636% -43 - C3 -1OX5 1.3 HIS5_YEAST
33 PsiBlast_CBE 54.6436% -52 * C3 *1OX4 3.2 HIS5_YEAST