@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1611: (2016-05-03 )
MSPATVLDSILEGVRADVAAREASVSLSEIKAAAAAAPPPLDVMAALREPGIGVIAEVKRASPSAGALATIADPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVTAGTHPSCPKPAR

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

137_P_8(1JCM)
TRPC_ECOLI
[Raw transfer]



137_B_2(1LBL)
TRPC_SULSO
[Raw transfer]



IGP_A_2(3T44)
TRPC_MYCTU
[Raw transfer]



137_B_2(1LBF)
TRPC_SULSO
[Raw transfer]



3RG_A_2(3T40)
TRPC_MYCTU
[Raw transfer]



4RG_A_2(3T55)
TRPC_MYCTU
[Raw transfer]



5RG_A_2(3T78)
TRPC_MYCTU
[Raw transfer]



UNL_B_6(3TSM)
TRPC_BRUA2
[Raw transfer]



MES_B_2(1JUL)
TRPC_SULSO
[Raw transfer]



ACY_B_14(1VC4)
?
[Raw transfer]



IGP_B_2(1A53)
TRPC_SULSO
[Raw transfer]
6 PsiBlast_PDB 97.6398%-115 - C2 -4FB7 - TRPC_MYCTU -
5 PsiBlast_PDB 96.95100%-119 - C2 -3T78 3.2 TRPC_MYCTU
73 HHSearch 96.12100%-122 - C2 -3QJA - TRPC_MYCTU -
1 PsiBlast_PDB 96.12100%-122 - C2 -3QJA - TRPC_MYCTU -
3 PsiBlast_PDB 95.88100%-118 - C2 -3T44 6.5 TRPC_MYCTU
2 PsiBlast_PDB 95.19100%-122 - C2 -3T40 3.2 TRPC_MYCTU
4 PsiBlast_PDB 95.08100%-117 - C2 -3T55 5.8 TRPC_MYCTU
74 HHSearch 76.3638%-113 - C2 -3TSM - TRPC_BRUA2 -
22 PsiBlast_CBE 75.1546%-108 - C2 -1VC4 3.1 ?
7 PsiBlast_PDB 74.9338%-114 - C2 -3TSM - TRPC_BRUA2 -
77 HHSearch 74.6046%-105 * C2 *1VC4 - ? -
21 PsiBlast_CBE 74.1238%-111 - C2 -3TSM 2.8 TRPC_BRUA2
8 PsiBlast_PDB 73.9746%-107 - C2 -1VC4 - ? -
75 HHSearch 71.4335%-105 - C2 -1PII - TRPC_ECOLI -
95 Fugue 70.8334%-108 - C2 -1PII - ? -
17 PsiBlast_PDB 69.1435%-103 - C2 -1PII - TRPC_ECOLI -
76 HHSearch 65.0428% -96 - C2 -1I4N - TRPC_THEMA -
32 PsiBlast_CBE 62.9931% -99 - C2 -1I4N - TRPC_THEMA -
31 PsiBlast_CBE 62.3931%-103 - C2 -1I4N - TRPC_THEMA -
16 PsiBlast_PDB 60.6636% -96 - C2 -1JCM 7.0 TRPC_ECOLI
11 PsiBlast_PDB 60.1338% -95 - C2 -1A53 6.0 TRPC_SULSO
14 PsiBlast_PDB 58.4538% -95 - C2 -1JUL 2.1 TRPC_SULSO
9 PsiBlast_PDB 58.2438% -92 - C2 -1LBF 7.5 TRPC_SULSO
10 PsiBlast_PDB 57.6038% -93 - C2 -1LBL 7.0 TRPC_SULSO