@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1625c: (2016-05-03 )
MAARKCGAPPIAADGSTRRPDCVTAVRTQARAPTQHYAESVARRQRVLTITAWLAVVVTGSFALMQLATGAGGWYIALINVFTAVTFAIVPLLHRFGGLVAPLTFIGTAYVAIFAIGWDVGTDAGAQFFFLVAAALVVLLVGIEHTALAVGLAAVAAGLVIALEFLVPPDTGLQPPWAMSVSFVLTTVSACGVAVATVWFALRDTARAEAVMEAEHDRSEALLANMLPASIAERLKEPERNIIADKYDEASVLFADIVGFTERASSTAPADLVRFLDRLYSAFDELVDQHGLEKIKVSGDSYMVVSGVPRPRPDHTQALADFALDMTNVAAQLKDPRGNPVPLRVGLATGPVVAGVVGSRRFFYDVWGDAVNVASRMESTDSVGQIQVPDEVYERLKDDFVLRERGHINVKGKGVMRTWYLIGRKVAADPGEVRGAEPRTAGV

Atome Classification :

(50 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

POP_A_5(3C14)

[Raw transfer]




POP_A_8(3C15)

[Raw transfer]




DAD_A_10(1CJT)

[Raw transfer]




DAD_A_10(1CJU)

[Raw transfer]




TAT_A_7(1CJK)

[Raw transfer]




DAD_A_11(1CJV)

[Raw transfer]




ONM_A_10(1U0H)

[Raw transfer]




ATP_A_10(3C16)

[Raw transfer]




TAT_B_6(3MAA)

[Raw transfer]




103_B_11(1CUL)

[Raw transfer]




ONM_A_10(1TL7)

[Raw transfer]




MI3_A_7(3G82)

[Raw transfer]




101_B_8(1CS4)

[Raw transfer]




ONA_A_10(2GVZ)

[Raw transfer]




128_A_10(2GVD)

[Raw transfer]




ONA_A_10(2GVZ)

[Raw transfer]




DAD_A_11(1CJV)

[Raw transfer]




DAD_A_10(1CJU)

[Raw transfer]




DAD_A_10(1CJT)

[Raw transfer]




FKP_A_9(2GVD)

[Raw transfer]




ONM_A_10(1U0H)

[Raw transfer]




MI3_A_7(3G82)

[Raw transfer]




FKP_A_6(1AZS)

[Raw transfer]




TAT_A_7(1CJK)

[Raw transfer]




FOK_D_4(1AB8)

[Raw transfer]




FKP_A_4(3MAA)

[Raw transfer]




FKP_A_6(1AZS)

[Raw transfer]




FOK_C_3(1AB8)
ADCY2_RAT
[Raw transfer]




ATP_A_10(3C16)

[Raw transfer]




ONM_A_10(1TL7)

[Raw transfer]




POP_A_5(3C14)

[Raw transfer]




101_B_8(1CS4)

[Raw transfer]




EDO_A_4(4NI2)

[Raw transfer]




POP_A_8(3C15)

[Raw transfer]




EDO_A_19(4P2F)
CYA1_MYCTU
[Raw transfer]




EDO_A_5(3UVJ)
GCYA3_HUMAN
[Raw transfer]




EDO_A_4(4NI2)

[Raw transfer]




EDO_A_5(3UVJ)
GCYA3_HUMAN
[Raw transfer]




103_B_11(1CUL)

[Raw transfer]




2 PsiBlast_PDB 96.5698%-124 - C6 -4P2F - CYA1_MYCTU -
50 HHSearch 96.1496%-124 - C6 -4P2F 3.0 CYA1_MYCTU
3 PsiBlast_PDB 87.3798%-103 - C6 -1YK9 - CYA1_MYCTU -
21 PsiBlast_CBE 87.0698%-121 - C6 -4P2X - CYA1_MYCTU -
1 PsiBlast_PDB 82.60100%-135 - C6 -4P2M - CYA1_MYCTU -
59 HHSearch 76.8637%-106 - C6 -2WZ1 - GCYB1_HUMAN -
22 PsiBlast_CBE 74.0134%-106 - C6 -2WZ1 - -
6 PsiBlast_PDB 73.5735%-103 - C6 -1CS4 4.0
4 PsiBlast_PDB 73.5536%-101 - C6 -4NI2 - -
24 PsiBlast_CBE 73.4934% -99 - C6 -3UVJ - -
25 PsiBlast_CBE 73.4534% -95 - C6 -3UVJ - GCYB1_HUMAN -
33 PsiBlast_CBE 73.3634%-106 - C6 -2GVD 4.5
5 PsiBlast_PDB 73.2834%-104 - C6 -2WZ1 - GCYB1_HUMAN -
17 PsiBlast_PDB 73.2635%-103 - C6 -1CJU 4.1
7 PsiBlast_PDB 72.9935% -93 - C6 -1U0H 5.6
31 PsiBlast_CBE 72.9634%-101 - C6 -3C14 Error
42 PsiBlast_CBE 72.7234%-108 - C6 -1AZS - -
36 PsiBlast_CBE 72.6935%-107 - C6 -1CUL 3.9
15 PsiBlast_PDB 72.6235%-104 - C6 -1CJK 4.4
41 PsiBlast_CBE 72.5634%-110 - C6 -1CJK 4.1
16 PsiBlast_PDB 72.5535%-101 - C6 -1CJT 5.1
40 PsiBlast_CBE 72.5434%-106 - C6 -1CJT 4.1
38 PsiBlast_CBE 72.4034%-112 - C6 -1CJV 3.1
28 PsiBlast_CBE 72.3034%-106 - C6 -3G82 2.8
51 HHSearch 72.2433% -86 - C6 -1AZS 4.5
18 PsiBlast_PDB 72.1435%-105 - C6 -1CJV 4.8
37 PsiBlast_CBE 72.0534%-108 - C6 -1CS4 3.5
34 PsiBlast_CBE 71.9634%-109 - C6 -1U0H 3.7
30 PsiBlast_CBE 71.8334%-109 - C6 -3C15 Error
19 PsiBlast_PDB 71.8335%-105 - C6 -1CUL 3.8
35 PsiBlast_CBE 71.7934%-100 - C6 -1TL7 3.7
27 PsiBlast_CBE 71.7834%-109 - C6 -3MAA 3.4
32 PsiBlast_CBE 71.7434% -98 - C6 -2GVZ 4.3
13 PsiBlast_PDB 71.6135% -99 - C6 -3G82 5.4
14 PsiBlast_PDB 71.5635% -98 - C6 -3MAA 3.2
39 PsiBlast_CBE 71.4734%-108 - C6 -1CJU 4.1
29 PsiBlast_CBE 71.4434%-104 - C6 -3C16 2.8
20 PsiBlast_PDB 71.2535% -91 - C6 -1TL7 6.0
12 PsiBlast_PDB 71.1535% -94 - C6 -3C16 3.7
10 PsiBlast_PDB 71.1535% -91 - C6 -3C14 2.2
53 HHSearch 71.1331% -98 - C6 -4NI2 2.5
11 PsiBlast_PDB 70.8735% -94 - C6 -3C15 4.4
8 PsiBlast_PDB 70.8735% -93 - C6 -2GVD 4.3
23 PsiBlast_CBE 70.6035% -94 - C6 -1AZS 4.5
54 HHSearch 70.4331% -93 - C6 -3UVJ 3.7 GCYA3_HUMAN
9 PsiBlast_PDB 69.9735% -90 - C6 -2GVZ 5.3
43 PsiBlast_CBE 69.8334%-102 - C6 -4NI2 2.5
26 PsiBlast_CBE 68.1034%-118 - C6 -1AB8 3.6
56 HHSearch 67.5735%-116 - C6 -1AB8 3.5 ADCY2_RAT
44 PsiBlast_CBE 67.4233%-100 - C6 -3UVJ 3.7 GCYA3_HUMAN