@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1640c: (2016-05-03 )
MGLHLTVPGLRRDGRGVQSNSHDTSSKTTADISRCPQHTDAGLQRAATPGISRLLGISSRSVTLTKPRSATRGNSRYHWVPAAAGWTVGVIATLSLLASVSPLIRWIIKVPREFINDYLFNFPDTNFAWSFVLALLAAALTARKRIAWLVLLANMVLAAVVNAAEIAAGGNTAAESFGENLGFAVHVVAIVVLVLGYREFWAKVRRGALFRAAAVWLAGAVVGIVASWGLVELFPGSLAPDERLGYAANRVVGFALADPDLFTGRPHVFLNAIFGLFGAFALIGAAIVLFLSQRADNALTGEDESAIRGLLDLYGKDDSLGYFATRRDKSVVFASSGRACITYRVEVGVCLASGDPVGDHRAWPQAVDAWLRLCQTYGWAPGVMGASSQGAQTYREAGLTALELGDEAILRPADFKLSGPEMRGVRQAVTRARRAGLTVRIRRHRDIAEDEMAQTITRADSWRDTETERGFSMALGRLGDPADSDCLLVEAIDPHNQVLAMLSLVPWGTTGVSLDLMRRSPQSPNGTIELMVSELALHAESLGITRISLNFAVFRAAFEQGAQLGAGPVARLWRGLLVFFSRWWQLETLYRSNMKYQPEWVPRYACYEDARVIPRVGVASVIAEGFLVLPFSRRNRVHTGHHPAVPERLAATGLLHHDGSAPDVSGLRQVGLTNGDGVERRLPEQVRVRFDKLEKLRSSGIDAFPVGRPPSHTVAQALAADHQASVSVSGRIMRIRNYGGVLFAQLRDWSGEMQVLLDNSRLDQGCAADFNAATDLGDLVEMTGHMGASKTGTPSLIVSGWRLIGKCLRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGATARPFVTHINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNPEFTLLEAYQAHADYLEWIDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRHHLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHLVECRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITGRSIRETLPFPLAKPH

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(1E24)
SYK2_ECOLI
[Raw transfer]



LAD_B_2(1E1T)
SYK2_ECOLI
[Raw transfer]



ACP_A_3(1E22)
SYK2_ECOLI
[Raw transfer]



LAD_A_2(4UP7)
?
[Raw transfer]



LAD_A_2(4UP7)
?
[Raw transfer]



ATP_A_2(4UP9)
?
[Raw transfer]



ANP_A_2(4UPA)
?
[Raw transfer]



GOL_B_9(1E1T)
SYK2_ECOLI
[Raw transfer]



GOL_B_11(1E1O)
SYK2_ECOLI
[Raw transfer]



LYS_A_3(4EX5)
SYK_BURTA
[Raw transfer]



LYS_A_3(4EX5)
SYK_BURTA
[Raw transfer]



LYS_B_3(1E1O)
SYK2_ECOLI
[Raw transfer]



LYS_B_3(1E1O)
SYK2_ECOLI
[Raw transfer]



LYS_C_3(1BBU)
SYK1_ECOLI
[Raw transfer]



LYS_B_4(4EX5)
SYK_BURTA
[Raw transfer]



KRS_A_4(4YCU)
SYK_HUMAN
[Raw transfer]



KRS_A_4(4YCU)
SYK_HUMAN
[Raw transfer]



KRS_B_8(4YCU)
SYK_HUMAN
[Raw transfer]
6 PsiBlast_PDB 96.1039% -65 - C6 -3E9H - SYK_GEOSE -
27 PsiBlast_CBE 95.7739% -65 - C6 -3E9H - SYK_GEOSE -
30 PsiBlast_CBE 95.6739% -70 - C6 -3A74 - SYK_GEOSE -
31 PsiBlast_CBE 95.4339% -68 - C6 -3A74 - SYK_GEOSE -
29 PsiBlast_CBE 95.3439% -69 - C6 -3A74 - SYK_GEOSE -
8 PsiBlast_PDB 95.3239% -70 - C6 -3A74 - SYK_GEOSE -
26 PsiBlast_CBE 95.3039% -70 - C6 -3E9H - SYK_GEOSE -
24 PsiBlast_CBE 95.3039% -69 - C6 -3E9I - SYK_GEOSE -
7 PsiBlast_PDB 95.2339% -65 - C6 -3E9I - SYK_GEOSE -
54 HHSearch 95.2040% -72 - C6 -3A74 - SYK_GEOSE -
56 HHSearch 95.0341% -64 - C6 -1E1O 3.0 SYK2_ECOLI
28 PsiBlast_CBE 94.9339% -68 - C6 -3E9H - SYK_GEOSE -
25 PsiBlast_CBE 94.9139% -66 - C6 -3E9I - SYK_GEOSE -
23 PsiBlast_CBE 94.6739% -68 - C6 -3E9I - SYK_GEOSE -
2 PsiBlast_PDB 94.2840% -62 - C6 -1E1O 3.0 SYK2_ECOLI
3 PsiBlast_PDB 94.1440% -63 - C6 -1E1T 8.2 SYK2_ECOLI
1 PsiBlast_PDB 94.1440% -63 - C6 -1LYL - SYK2_ECOLI -
21 PsiBlast_CBE 94.0440% -65 - C6 -1LYL - SYK2_ECOLI -
5 PsiBlast_PDB 93.7740% -65 - C6 -1E24 7.4 SYK2_ECOLI
75 Fugue 93.6241% -66 - C6 -1LYL - SYK2_ECOLI -
9 PsiBlast_PDB 93.5739% -63 - C6 -1BBU 2.7 SYK1_ECOLI
4 PsiBlast_PDB 93.0740% -64 - C6 -1E22 7.1 SYK2_ECOLI
59 HHSearch 92.5537% -67 - C6 -4UP7 7.8 ?
55 HHSearch 91.9440% -64 - C6 -4EX5 2.7 SYK_BURTA
57 HHSearch 91.5735% -68 * C6 *4YCU 6.1 SYK_HUMAN
36 PsiBlast_CBE 91.5535% -70 - C6 -4YCU 6.5 SYK_HUMAN
14 PsiBlast_PDB 91.2235% -68 - C6 -4YCU 6.1 SYK_HUMAN
11 PsiBlast_PDB 90.3839% -65 - C6 -4EX5 2.7 SYK_BURTA
32 PsiBlast_CBE 89.7639% -65 - C6 -4EX5 3.9 SYK_BURTA
20 PsiBlast_PDB 65.4146% -46 - C6 -4UPA 4.5 ?
19 PsiBlast_PDB 65.3946% -45 - C6 -4UP9 4.4 ?
51 PsiBlast_CBE 65.3746% -42 - C6 -4UP7 4.5 ?