@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1654: (2016-05-03 )
MSRIEALPTHIKAQVLAEALPWLKQLHGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGIHPVVVHGGGPQITAMLRRLGIEGDFKGGFRVTTPEVLDVARMVLFGQVGRELVNLINAHGPYAVGITGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQVNTAAMLDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEIDTGTLAQLLPTLESGMVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVRG

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_6(4USJ)
NAGK_ARATH
[Raw transfer]




ADP_B_12(2RD5)
NAGK_ARATH
[Raw transfer]




X2W_B_10(4USJ)
NAGK_ARATH
[Raw transfer]




ADP_A_9(2RD5)
NAGK_ARATH
[Raw transfer]




ADP_A_9(2RD5)
NAGK_ARATH
[Raw transfer]




NLG_A_15(2BTY)
ARGB_THEMA
[Raw transfer]




NLG_A_15(2BTY)
ARGB_THEMA
[Raw transfer]




NLG_B_17(2BTY)
ARGB_THEMA
[Raw transfer]




NLG_C_19(2BTY)
ARGB_THEMA
[Raw transfer]




NLG_A_7(2JJ4)
ARGB_SYNE7
[Raw transfer]




NLG_B_8(2JJ4)
ARGB_SYNE7
[Raw transfer]




91 HHSearch 99.88100%-142 - C2 -2AP9 - ARGB_MYCTU -
1 PsiBlast_PDB 99.2597%-142 - C2 -2AP9 - ARGB_MYCTU -
29 PsiBlast_CBE 81.6347%-131 - C2 -2BUF - ARGB_PSEAE -
30 PsiBlast_CBE 80.8847%-133 - C2 -2BUF - ARGB_PSEAE -
25 PsiBlast_CBE 80.8647%-136 - C2 -2BUF - ARGB_PSEAE -
26 PsiBlast_CBE 80.7547%-136 - C2 -2BUF - ARGB_PSEAE -
93 HHSearch 79.8246%-135 - C2 -2BUF - ARGB_PSEAE -
31 PsiBlast_CBE 79.7747%-130 - C2 -2BUF - ARGB_PSEAE -
2 PsiBlast_PDB 79.7347%-136 - C2 -2BUF - ARGB_PSEAE -
34 PsiBlast_CBE 79.5244%-131 - C2 -2V5H - ARGB_SYNE7 -
33 PsiBlast_CBE 79.5244%-131 - C2 -2V5H - ARGB_SYNE7 -
4 PsiBlast_PDB 79.4444%-132 - C2 -2V5H - ARGB_SYNE7 -
32 PsiBlast_CBE 79.2444%-132 - C2 -2V5H - ARGB_SYNE7 -
94 HHSearch 78.9745%-129 - C2 -2V5H - ARGB_SYNE7 -
36 PsiBlast_CBE 78.7944%-131 - C2 -2V5H - ARGB_SYNE7 -
35 PsiBlast_CBE 78.7244%-132 - C2 -2V5H - ARGB_SYNE7 -
24 PsiBlast_CBE 78.5047%-131 - C2 -2BUF - ARGB_PSEAE -
21 PsiBlast_CBE 78.1547%-130 - C2 -2BUF - ARGB_PSEAE -
6 PsiBlast_PDB 77.8741%-135 - C2 -2RD5 4.6 NAGK_ARATH
28 PsiBlast_CBE 77.8647%-130 - C2 -2BUF - ARGB_PSEAE -
37 PsiBlast_CBE 77.8344%-131 - C2 -2JJ4 3.5 ARGB_SYNE7
41 PsiBlast_CBE 77.6041%-131 - C2 -4USJ 5.6 NAGK_ARATH
39 PsiBlast_CBE 77.4541%-132 - C2 -2BTY 2.1 ARGB_THEMA
92 HHSearch 76.9941%-130 * C2 *2RD5 5.3 NAGK_ARATH
3 PsiBlast_PDB 76.8644%-129 - C2 -2JJ4 3.2 ARGB_SYNE7
40 PsiBlast_CBE 76.7741%-129 - C2 -2RD5 5.3 NAGK_ARATH
95 HHSearch 76.7442%-132 - C2 -2BTY 2.2 ARGB_THEMA
38 PsiBlast_CBE 76.5241%-131 - C2 -2BTY 2.5 ARGB_THEMA
5 PsiBlast_PDB 76.1741%-133 - C2 -2BTY 2.2 ARGB_THEMA
7 PsiBlast_PDB 76.1641%-128 - C2 -4USJ 4.6 NAGK_ARATH