@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1663: (2016-05-04 )
MEAGPQRIAQMLAELVELFKTEALHRLPVKSWDVRHAREAYRFLSQARHVGKVVLTMPDAWAAGTVLITGGTGMAGSAVARHLVSRYGVRQVVLASRAGEHTESVAALVDELGSAGARVQVVSCDVADRDAVAGLVASQPDLTAVFHAAGVLDDAVITGLTPERVDKVLRAKVDGAWNLHELTRHLDVSAFVLFSSMAGIVGAPGQANYAAANAFLDGLAAYRRSRGLAALSVAWGLWEQASAMTEHLGERDRVRMSRVGLAPLPTNQAMGFLDAALLADRPVVVAARLDRAALAGAELPALFSQLVAGPIRRIIDGADEVSGSGLASRLHGLTPEQRHRELTELVCSNAAIVLGHSGTEIDAHKAFQDLGFDSLTAVELRNRLKTATGLTLPPTLIFDYPTAAELAEHLDIQLANAPAVTVDQPNPSTRFNEVTRELQALLDQPNWNPDDKTRLIKRLQAILTDCTAPPASSGPSTTHDDEDITTATESQLFAILDDELGP

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_B_4(3MJV)
?
[Raw transfer]



NDP_A_3(3MJT)
?
[Raw transfer]



NDP_A_3(3MJV)
?
[Raw transfer]



NDP_A_3(4DIF)
?
[Raw transfer]



NDP_B_4(3MJE)
?
[Raw transfer]



NDP_B_5(3MJT)
?
[Raw transfer]



NDP_A_3(3MJS)
?
[Raw transfer]



NDP_B_4(4HXY)
?
[Raw transfer]



NDP_B_7(3MJS)
?
[Raw transfer]



NDP_A_3(3MJE)
?
[Raw transfer]



NDP_A_3(4HXY)
?
[Raw transfer]



NDP_B_4(4DIF)
?
[Raw transfer]



NDP_A_3(4HXY)
?
[Raw transfer]



NDP_A_3(3MJE)
?
[Raw transfer]



NDP_B_2(2FR1)

[Raw transfer]



NDP_B_2(2FR1)

[Raw transfer]



NDP_B_2(2FR0)

[Raw transfer]



NDP_B_2(2FR1)

[Raw transfer]



ACA_B_5(4HXY)
?
[Raw transfer]
77 Fugue 83.7055% -98 - C2 -3SLK - ? -
73 Fugue 72.9338% -96 - C2 -2FR1 6.4
21 PsiBlast_CBE 67.6055% -99 - C2 -3SLK - ? -
1 PsiBlast_PDB 66.7655%-100 - C2 -3SLK - ? -
4 PsiBlast_PDB 66.1247%-101 - C2 -3MJV 12.3 ?
5 PsiBlast_PDB 66.1047%-108 - C2 -3MJC - ? -
25 PsiBlast_CBE 65.8447%-106 - C2 -3MJC - ? -
86 HHSearch 65.2346%-108 - C2 -3MJE 8.5 ?
29 PsiBlast_CBE 65.0439%-109 - C2 -4IMP - ? -
22 PsiBlast_CBE 64.7947% -99 - C2 -3MJV 12.4 ?
7 PsiBlast_PDB 64.6047%-101 - C2 -3MJS 12.5 ?
81 HHSearch 64.5742%-102 - C2 -4IMP - ? -
23 PsiBlast_CBE 64.4447% -98 - C2 -3MJS 12.6 ?
80 HHSearch 64.1556% -95 - C2 -3SLK - ? -
24 PsiBlast_CBE 63.6847%-104 - C2 -3MJE 12.1 ?
10 PsiBlast_PDB 63.5247% -98 - C2 -4DIF 12.6 ?
83 HHSearch 63.5146%-116 - C2 -2FR1 6.4
26 PsiBlast_CBE 63.2947% -99 - C2 -4DIF 12.5 ?
27 PsiBlast_CBE 63.2147% -98 - C2 -3MJT 12.5 ?
6 PsiBlast_PDB 63.1447%-106 - C2 -3MJE 8.7 ?
11 PsiBlast_PDB 62.6947%-101 - C2 -3MJT 12.5 ?
84 HHSearch 61.8341%-107 * C2 *4HXY 12.1 ?
3 PsiBlast_PDB 58.1346%-106 - C2 -2FR1 5.0
15 PsiBlast_PDB 57.6340%-106 - C2 -4HXY 12.2 ?
31 PsiBlast_CBE 57.1240%-100 - C2 -4HXY 12.1 ?
2 PsiBlast_PDB 55.8346% -96 - C2 -2FR0 7.1