@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1687c: (2016-05-04 )
MMISSSDELLRDGADPAVIIDQLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGSVSVLGQPAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVDLRDHRTARCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRFTALARRGTTLLVSSHVMDEADRCGDLLLLRQGQLLAHTTPHRLRKETGCTSLEEAFLSIVRRTTTVPAAG

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ADP_C_11(4HLU)
ECFA1_THEMA
[Raw transfer]




ADP_A_2(3NHB)

[Raw transfer]




ADP_A_3(3NHA)

[Raw transfer]




ATP_A_2(3NH9)

[Raw transfer]




ADP_D_7(4HLU)
ECFA1_THEMA
[Raw transfer]




1 PsiBlast_PDB 92.6930%-133 - C1 -1VPL - ? -
80 Fugue 90.7829%-113 - C1 -3TUZ - METN_ECOLI -
85 Fugue 90.2127%-107 - C1 -1Z47 - ? -
68 HHSearch 87.7530%-123 - C1 -3TUI - METN_ECOLI -
84 Fugue 86.8829%-117 - C1 -1OXS - ? -
5 PsiBlast_PDB 86.1228%-125 - C1 -4RVC - ? -
63 HHSearch 83.3631%-118 - C1 -3FVQ 6.4 FBPC_NEIG1
65 HHSearch 83.1728%-120 - C1 -3RLF - MALK_ECOLI -
77 HHSearch 83.0830%-119 - C1 -4HUQ - ECFA2_LACBA -
19 PsiBlast_PDB 82.9831%-133 - C1 -4U00 - ? -
24 PsiBlast_CBE 82.6231%-129 - C1 -4U02 - ? -
20 PsiBlast_PDB 82.3031%-128 - C1 -4U02 - ? -
25 PsiBlast_CBE 82.1731%-131 - C1 -4U02 - ? -
26 PsiBlast_CBE 81.5631%-127 - C1 -4U02 - ? -
58 HHSearch 80.6729%-115 - C1 -1Z47 - ? -
12 PsiBlast_PDB 80.0130%-125 - C1 -4WBS - ? -
69 HHSearch 79.7329%-118 - C1 -1OXX - ? -
38 PsiBlast_CBE 78.8834%-121 - C1 -3TUZ - METN_ECOLI -
36 PsiBlast_CBE 78.5934%-118 - C1 -3TUZ - METN_ECOLI -
40 PsiBlast_CBE 78.4734%-120 - C1 -3TUI - METN_ECOLI -
50 PsiBlast_CBE 72.4232%-108 - C1 -3FVQ 5.3 FBPC_NEIG1
51 PsiBlast_CBE 72.2432%-108 - C1 -3FVQ 4.5 FBPC_NEIG1
44 PsiBlast_CBE 67.7331%-123 - C1 -4HLU 4.7 ECFA1_THEMA
45 PsiBlast_CBE 67.0831%-123 - C1 -4HLU 4.0 ECFA1_THEMA
48 PsiBlast_CBE 60.8231%-109 - C1 -3NH9 5.2
47 PsiBlast_CBE 60.7631%-110 - C1 -3NHA 4.9
46 PsiBlast_CBE 60.4031%-109 - C1 -3NHB 4.8