@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1689: (2016-05-04 )
MSGMILDELSWRGLIAQSTDLDTLAAEAQRGPMTVYAGFDPTAPSLHAGHLVPLLTLRRFQRAGHRPIVLAGGATGMIGDPRDVGERSLNEADTVAEWTERIRGQLERFVDFDDSPMGAIVENNLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRLAGEGISYTEFSYLLLQANDYVELHRRHGCTLQIGGADQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGTKFGKSTGGGSLWLDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQATAQRPQQRAAQRRLASELTVLVHGEAATAAVEHASRALFGRGELARLDEATLAAALRETTVAELKPGSPDGIVDLLVASGLSASKGAARRTIHEGGVSVNNIRVDNEEWVPQSSDFLHGRWLVLRRGKRSIAGVERIG

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

YSA_H_8(1VBM)
SYY_ECOLI
[Raw transfer]



YSA_C_3(1VBN)
SYY_ECOLI
[Raw transfer]



YSA_D_4(1VBN)
SYY_ECOLI
[Raw transfer]



YSA_G_7(1VBM)
SYY_ECOLI
[Raw transfer]



YSA_B_4(2PID)
SYYM_HUMAN
[Raw transfer]



YSA_A_3(2PID)
SYYM_HUMAN
[Raw transfer]



YSA_A_3(2PID)
SYYM_HUMAN
[Raw transfer]



AZY_A_2(2YXN)
SYY_ECOLI
[Raw transfer]



AZY_A_2(2YXN)
SYY_ECOLI
[Raw transfer]



TYA_C_3(3TS1)
SYY_GEOSE
[Raw transfer]



TYR_E_5(1X8X)
SYY_ECOLI
[Raw transfer]



TYR_S_3(1TYB)
SYY_GEOSE
[Raw transfer]



TYR_S_3(1TYA)
SYY_GEOSE
[Raw transfer]



TYR_C_3(4TS1)
SYY_GEOSE
[Raw transfer]



TYR_S_3(1TYD)
SYY_GEOSE
[Raw transfer]



TYR_C_3(1Y42)
SYYM_NEUCR
[Raw transfer]



TYR_C_3(1WQ4)
SYY_ECOLI
[Raw transfer]



IYR_C_3(1WQ3)
SYY_ECOLI
[Raw transfer]



TYR_D_4(4TS1)
SYY_GEOSE
[Raw transfer]



TYR_C_3(1Y42)
SYYM_NEUCR
[Raw transfer]



485_C_3(1JIL)
SYY_STAAE
[Raw transfer]



485_C_3(1JIL)
SYY_STAAE
[Raw transfer]



383_C_3(1JII)
SYY_STAAE
[Raw transfer]



545_C_3(1JIK)
SYY_STAAE
[Raw transfer]



629_C_3(1JIJ)
SYY_STAAE
[Raw transfer]



TYR_X_2(4OJM)
SYYM_NEUCR
[Raw transfer]
1 PsiBlast_PDB 99.68100%-114 - C3 -2JAN - SYY_MYCTU -
38 HHSearch 98.8799%-114 - C3 -2JAN - SYY_MYCTU -
17 PsiBlast_PDB 76.3251% -94 - C3 -1WQ4 2.9 SYY_ECOLI
5 PsiBlast_PDB 74.9955% -96 - C3 -1TYD 3.4 SYY_GEOSE
3 PsiBlast_PDB 74.8949% -94 - C3 -3TS1 6.5 SYY_GEOSE
18 PsiBlast_PDB 74.8452% -97 - C3 -1VBN 7.5 SYY_ECOLI
4 PsiBlast_PDB 74.7156% -95 - C3 -1TYC - SYY_GEOSE -
16 PsiBlast_PDB 74.6251% -92 - C3 -2YXN 3.5 SYY_ECOLI
6 PsiBlast_PDB 74.6255% -95 - C3 -1TYA 2.8 SYY_GEOSE
15 PsiBlast_PDB 74.5551% -91 - C3 -1WQ3 3.8 SYY_ECOLI
13 PsiBlast_PDB 74.5552% -93 - C3 -1X8X 3.2 SYY_ECOLI
8 PsiBlast_PDB 74.5055% -93 - C3 -1TYB 2.8 SYY_GEOSE
7 PsiBlast_PDB 74.3955% -95 - C3 -4TS1 2.7 SYY_GEOSE
21 PsiBlast_CBE 74.3555% -95 - C3 -4TS1 2.9 SYY_GEOSE
23 PsiBlast_CBE 74.2952% -97 - C3 -1VBN 7.7 SYY_ECOLI
2 PsiBlast_PDB 74.2349% -93 - C3 -2TS1 - SYY_GEOSE -
12 PsiBlast_PDB 74.0543% -91 - C3 -1JIL 5.4 SYY_STAAE
45 HHSearch 73.8252% -92 - C3 -2YXN 3.5 SYY_ECOLI
40 HHSearch 73.3249% -93 * C3 *2TS1 - SYY_GEOSE -
22 PsiBlast_CBE 73.2452% -97 - C3 -1VBM 8.2 SYY_ECOLI
41 HHSearch 73.0743% -91 - C3 -1JIL 5.5 SYY_STAAE
11 PsiBlast_PDB 72.6143% -88 - C3 -1JIK 5.8 SYY_STAAE
14 PsiBlast_PDB 72.5152% -94 - C3 -1VBM 7.4 SYY_ECOLI
10 PsiBlast_PDB 72.0743% -94 - C3 -1JIJ 3.6 SYY_STAAE
9 PsiBlast_PDB 70.0243% -90 - C3 -1JII 3.4 SYY_STAAE
43 HHSearch 66.8534% -86 - C3 -1Y42 3.2 SYYM_NEUCR
25 PsiBlast_CBE 64.6140% -93 - C3 -2PID 7.7 SYYM_HUMAN
44 HHSearch 64.4639% -87 - C3 -2PID 7.8 SYYM_HUMAN
19 PsiBlast_PDB 62.8940% -91 - C3 -2PID 7.8 SYYM_HUMAN
26 PsiBlast_CBE 60.5536% -85 - C3 -4OJM 3.4 SYYM_NEUCR
27 PsiBlast_CBE 60.4536% -86 - C3 -1Y42 3.2 SYYM_NEUCR