@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1700: (2016-05-04 )
MAEHDFETISSETLHTGAIFALRRDQVRMPGGGIVTREVVEHFGAVAIVAMDDNGNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFSDESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLRGEIVNSIAIAGVLAVHAVTTGFAQPRPLDTEWIDRPTAFAARRAER

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

APR_A_2(1MQE)
?
[Raw transfer]




APR_A_2(1MQE)
?
[Raw transfer]




ADV_A_5(1MQW)
?
[Raw transfer]




APR_C_3(1MK1)
?
[Raw transfer]




APR_C_3(1MK1)
?
[Raw transfer]




APR_B_15(5C7T)
?
[Raw transfer]




APR_A_3(5C7T)
?
[Raw transfer]




A12_A_3(1MR2)
?
[Raw transfer]




GLC_B_12(5C8L)
?
[Raw transfer]




GLC_A_3(5C8L)
?
[Raw transfer]




GOL_B_18(5C7Q)
?
[Raw transfer]




GOL_A_9(5C7Q)
?
[Raw transfer]




AMP_A_3(1V8S)
?
[Raw transfer]




GD_A_3(1V8M)
?
[Raw transfer]




GD_A_4(1V8M)
?
[Raw transfer]




APR_A_4(1V8Y)
?
[Raw transfer]




4 PsiBlast_PDB 98.31100%-107 - C2 -1MQW 4.1 ?
3 PsiBlast_PDB 94.91100%-116 - C2 -1MQE 5.2 ?
64 Fugue 94.8298%-116 - C2 -1MQE 5.2 ?
2 PsiBlast_PDB 93.94100%-115 - C2 -1MP2 - ? -
5 PsiBlast_PDB 93.80100%-114 - C2 -1MR2 3.3 ?
1 PsiBlast_PDB 93.47100%-115 - C2 -1MK1 5.2 ?
43 HHSearch 93.45100%-114 - C2 -1MK1 5.2 ?
48 HHSearch 65.4630%-100 * C2 *5C7Q - ? -
17 PsiBlast_PDB 61.7338%-106 - C2 -1V8W - ? -
16 PsiBlast_PDB 61.6138%-108 - C2 -1V8U - ? -
47 HHSearch 61.3028% -90 - C2 -2YVP - ? -
15 PsiBlast_PDB 60.5939%-107 - C2 -1V8R - ? -
14 PsiBlast_PDB 60.4139%-110 - C2 -1V8T - ? -
44 HHSearch 60.0224% -90 - C2 -1G0S - ADPP_ECOLI -
50 HHSearch 59.8126%-112 - C2 -2W4E - ? -
66 Fugue 59.5923% -92 - C2 -1G0S - ADPP_ECOLI -
10 PsiBlast_PDB 59.4039%-107 - C2 -1V8L - ? -
11 PsiBlast_PDB 59.2739%-106 - C2 -1V8M - ?
51 HHSearch 58.6136%-105 - C2 -1V8Y 4.4 ?
12 PsiBlast_PDB 58.5639%-112 - C2 -1V8N - ? -
8 PsiBlast_PDB 58.0737% -85 - C2 -5C8L 2.2 ?
22 PsiBlast_CBE 57.8037% -85 - C2 -5C8L 2.3 ?
13 PsiBlast_PDB 57.3739%-112 - C2 -1V8S 2.6 ?
6 PsiBlast_PDB 56.8837% -84 - C2 -5C7Q 3.2 ?
21 PsiBlast_CBE 56.5037% -82 - C2 -5C7Q 3.2 ?
23 PsiBlast_CBE 56.0837% -84 - C2 -5C7T 4.0 ?
7 PsiBlast_PDB 55.7437% -86 - C2 -5C7T 3.8 ?