@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1747: (2016-05-04 )
MPMSQPAAPPVLTVRYEGSERTFAAGHDVVVGRDLRADVRVAHPLISRAHLLLRFDQGRWVAIDNGSLNGLYLNNRRVPVVDIYDAQRVHIGNPDGPALDFEVGRHRGSAGRPPQTTSIRLPNLSAGAWPTDGPPQTGTLGSGQLQQLPPATTRIPAAPPSGPQPRYPTGGQQLWPPSGPQRAPQIYRPPTAAPPPAGARGGTEAGNLATSMMKILRPGRLTGELPPGAVRIGRANDNDIVIPEVLASRHHATLVPTPGGTEIRDNRSINGTFVNGARVDAALLHDGDVVTIGNIDLVFADGTLARREENLLETRVGGLDVRGVTWTIDGDKTLLDGISLTARPGMLTAVIGPSGAGKSTLARLVAGYTHPTDGTVTFEGHNVHAEYASLRSRIGMVPQDDVVHGQLTVKHALMYAAELRLPPDTTKDDRTQVVARVLEELEMSKHIDTRVDKLSGGQRKRASVALELLTGPSLLILDEPTSGLDPALDRQVMTMLRQLADAGRVVLVVTHSLTYLDVCDQVLLLAPGGKTAFCGPPTQIGPVMGTTNWADIFSTVADDPDAAKARYLARTGPTPPPPPVEQPAELGDPAHTSLFRQFSTIARRQLRLIVSDRGYFVFLALLPFIMGALSMSVPGDVGFGFPNPMGDAPNEPGQILVLLNVGAVFMGTALTIRDLIGERAIFRREQAVGLSTTAYLIAKVCVYTVLAVVQSAIVTVIVLVGKGGPTQGAVALSKPDLELFVDVAVTCVASAMLGLALSAIAKSNEQIMPLLVVAVMSQLVFSGGMIPVTGRVPLDQMSWVTPARWGFAASAATVDLIKLVPGPLTPKDSHWHHTASAWWFDMAMLVALSVIYVGFVRWKIRLKAC

Atome Classification :

(48 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ATP_C_12(2IXF)
TAP1_RAT
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_D_15(2IXF)

[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_B_8(2IXF)
TAP1_RAT
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]




ATP_A_5(2IXF)
TAP1_RAT
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




ADP_A_3(3NHA)

[Raw transfer]




ADP_A_2(3NHB)

[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ATP_A_2(3NH9)

[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ANP_A_2(4AYW)
ABCBA_HUMAN
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




MES_C_5(2ZU0)
SUFC_ECOLI
[Raw transfer]




110 HHSearch 71.3028%-106 - C4 -4HUQ - ECFA2_LACBA -
108 HHSearch 70.3429%-102 - C4 -3TUI - METN_ECOLI -
88 Fugue 70.1118% -31 - C4 -3B60 - MSBA_SALTY -
106 HHSearch 70.0429%-110 - C4 -3RLF - MALK_ECOLI -
113 HHSearch 69.1830%-107 - C4 -4MRS - ATM1_NOVAD -
89 Fugue 68.6924% -98 - C4 -3TUZ - METN_ECOLI -
99 HHSearch 68.2029%-106 - C4 -1Z47 - ? -
107 HHSearch 68.1327%-106 - C4 -1OXX - ? -
103 HHSearch 67.4529%-104 - C4 -2IT1 - ? -
104 HHSearch 67.1626%-111 - C4 -2YYZ - ? -
116 HHSearch 66.0629% -90 - C4 -4HUQ - ECFA1_LACBA -
102 HHSearch 66.0027%-101 - C4 -3FVQ - FBPC_NEIG1 -
7 PsiBlast_PDB 65.7631%-103 - C4 -1VPL - ? -
105 HHSearch 65.5427%-108 - C4 -1V43 - ? -
109 HHSearch 65.4927%-111 - C4 -3D31 - ? -
111 HHSearch 65.3228%-104 - C4 -4Q9H - MDR1A_MOUSE -
117 HHSearch 64.9730% -95 - C4 -3WMG - ? -
114 HHSearch 64.9726%-104 - C4 -4MYC - ATM1_YEAST -
8 PsiBlast_PDB 64.5532% -82 - C4 -3NH6 - -
10 PsiBlast_PDB 64.3132% -80 - C4 -3NHA 5.2
39 PsiBlast_CBE 64.0333% -87 - C4 -4U00 4.3 ?
9 PsiBlast_PDB 64.0332% -80 - C4 -3NH9 5.2
32 PsiBlast_CBE 63.9033% -99 - C4 -2OLK 3.7 ?
11 PsiBlast_PDB 63.7432% -79 - C4 -3NHB 5.5
30 PsiBlast_CBE 63.3833% -99 - C4 -2OLK 4.8 ?
31 PsiBlast_CBE 63.3733% -97 - C4 -2OLK 5.0 ?
26 PsiBlast_CBE 63.0333% -97 - C4 -2Q0H 4.9 ?
24 PsiBlast_CBE 62.8633% -97 - C4 -3C41 6.1 ?
14 PsiBlast_PDB 62.7433% -96 - C4 -2OLK 3.5 ?
25 PsiBlast_CBE 62.6533% -94 - C4 -3C4J 5.0 ?
17 PsiBlast_PDB 62.4033% -88 - C4 -3C4J 4.9 ?
12 PsiBlast_PDB 62.2333% -95 - C4 -3C41 4.3 ?
33 PsiBlast_CBE 62.1133% -97 - C4 -2OLJ 4.8 ?
16 PsiBlast_PDB 62.1033% -93 - C4 -2Q0H 4.6 ?
13 PsiBlast_PDB 62.0733% -97 - C4 -2OLJ 3.7 ?
3 PsiBlast_PDB 61.7030% -95 - C4 -4YMU 4.6 ?
78 PsiBlast_CBE 61.6833% -90 - C4 -3FVQ 5.2 FBPC_NEIG1
4 PsiBlast_PDB 60.4730% -95 - C4 -4YMV 5.0 ?
40 PsiBlast_CBE 60.2532% -89 - C4 -4AYW 4.5 ABCBA_HUMAN
41 PsiBlast_CBE 60.2032% -82 - C4 -4AYX 4.2 ABCBA_HUMAN
79 PsiBlast_CBE 59.9733% -94 - C4 -3FVQ 5.2 FBPC_NEIG1
42 PsiBlast_CBE 59.7532% -78 - C4 -4AYT 4.7 ABCBA_HUMAN
72 PsiBlast_CBE 58.4331% -84 - C4 -2IXF 5.7 TAP1_RAT
74 PsiBlast_CBE 56.9931% -89 - C4 -2IXF 5.4 TAP1_RAT
73 PsiBlast_CBE 56.3531% -90 - C4 -2IXF 5.5 TAP1_RAT
71 PsiBlast_CBE 56.3031% -87 - C4 -2IXF 5.8
80 PsiBlast_CBE 54.1732% -54 - C4 -2ZU0 2.2 SUFC_ECOLI
70 PsiBlast_CBE 54.1231% -75 - C4 -1VCI 3.5 ?