@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1844c: (2016-05-05 )
MSSSESPAGIAQIGVTGLAVMGSNIARNFARHGYTVAVHNRSVAKTDALLKEHSSDGKFVRSETIPEFLAALEKPRRVLIMVKAGEATDADAVINELADAMEPGDIIIDGGNALYTDTMRREKAMRERGLHFVGAGISGGEEGALNGPSIMPGGPAESYQSLGPLLEEISAHVDGVPCCTHIGPDGSGHFVKMVHNGIEYSDMQLIGEAYQLMRDGLGLTAPAIADVFTEWNNGDLDSYLVEITAEVLRQTDAKTGKPLVDVIVDRAEQKGTGRWTVKSALDLGVPVTGIAEAVFARALSGSVGQRSAASGLASGKLGEQPADPATFTEDVRQALYASKIVAYAQGFNQIQAGSAEFGWDITPGDLATIWRGGCIIRAKFLNHIKEAFDASPNLASLIVAPYFRGAVESAIDSWRRVVSTAAQLGIPTPGFSSALSYYDALRTARLPAALTQAQRDFFGAHTYGRIDEPGKFHTLWSSDRTEVPV

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

6PG_A_3(2W90)
?
[Raw transfer]



6PG_B_4(2ZYA)
6PGD_ECOLI
[Raw transfer]



6PG_A_3(2ZYA)
6PGD_ECOLI
[Raw transfer]



6PG_A_2(2IYO)
6PGD_LACLM
[Raw transfer]



6PG_C_3(1PGP)
6PGD_SHEEP
[Raw transfer]



6PG_A_3(2W8Z)
?
[Raw transfer]



NDP_G_7(1PGO)
6PGD_SHEEP
[Raw transfer]



NBP_A_4(1PGN)
6PGD_SHEEP
[Raw transfer]



GLO_A_3(2ZYD)
6PGD_ECOLI
[Raw transfer]



6PG_B_7(2W8Z)
?
[Raw transfer]



ATR_B_4(3FWN)
6PGD_ECOLI
[Raw transfer]



3PG_A_5(4GWK)
6PGD_HUMAN
[Raw transfer]



MES_A_3(4GWG)
6PGD_HUMAN
[Raw transfer]



2AM_I_9(1PGQ)
6PGD_SHEEP
[Raw transfer]



MES_A_4(4GWK)
6PGD_HUMAN
[Raw transfer]



MES_A_3(4GWG)
6PGD_HUMAN
[Raw transfer]



FLC_E_5(2P4Q)
6PGD1_YEAST
[Raw transfer]



FLC_E_5(2P4Q)
6PGD1_YEAST
[Raw transfer]



TRS_A_4(2W90)
?
[Raw transfer]
1 PsiBlast_PDB 97.2856% -91 - C2 -2W8Z 3.4 ?
54 HHSearch 97.2053% -91 - C2 -2ZYD - 6PGD_ECOLI -
5 PsiBlast_PDB 97.1953% -91 - C2 -2ZYD - 6PGD_ECOLI -
2 PsiBlast_PDB 97.0156% -91 - C2 -2W90 4.4 ?
13 PsiBlast_PDB 96.9851% -90 - C2 -1PGP 3.2 6PGD_SHEEP
22 PsiBlast_CBE 96.7056% -90 - C2 -2W8Z 2.7 ?
36 PsiBlast_CBE 96.6350% -89 - C2 -2JKV - 6PGD_HUMAN -
21 PsiBlast_CBE 96.5856% -91 - C2 -2W90 2.0 ?
6 PsiBlast_PDB 96.5552% -90 - C2 -2ZYG - ? -
3 PsiBlast_PDB 96.2853% -90 - C2 -3FWN - 6PGD_ECOLI -
35 PsiBlast_CBE 96.1750% -88 - C2 -2JKV - 6PGD_HUMAN -
4 PsiBlast_PDB 96.1753% -90 - C2 -2ZYA 3.9 6PGD_ECOLI
11 PsiBlast_PDB 96.1651% -89 - C2 -1PGN 8.0 6PGD_SHEEP
15 PsiBlast_PDB 96.1151% -89 - C2 -2PGD - 6PGD_SHEEP -
33 PsiBlast_CBE 95.9250% -87 - C2 -2JKV - 6PGD_HUMAN -
12 PsiBlast_PDB 95.9251% -89 - C2 -1PGO 7.5 6PGD_SHEEP
23 PsiBlast_CBE 95.9153% -89 - C2 -3FWN 6.1 6PGD_ECOLI
32 PsiBlast_CBE 95.4850% -88 - C2 -2JKV - 6PGD_HUMAN -
16 PsiBlast_PDB 95.4650% -86 - C2 -2JKV - 6PGD_HUMAN -
34 PsiBlast_CBE 95.4450% -87 - C2 -2JKV - 6PGD_HUMAN -
24 PsiBlast_CBE 95.3253% -88 - C2 -2ZYD 3.2 6PGD_ECOLI
25 PsiBlast_CBE 95.2553% -87 - C2 -2ZYA 3.9 6PGD_ECOLI
18 PsiBlast_PDB 95.2450% -88 - C2 -4GWK 3.4 6PGD_HUMAN
14 PsiBlast_PDB 95.0951% -88 - C2 -1PGQ 4.5 6PGD_SHEEP
55 HHSearch 94.2750% -85 - C2 -4GWG 2.8 6PGD_HUMAN
17 PsiBlast_PDB 94.0350% -86 - C2 -4GWG 2.8 6PGD_HUMAN
7 PsiBlast_PDB 93.3550% -89 - C2 -2IYO 3.9 6PGD_LACLM
53 HHSearch 93.0949% -86 - C2 -2P4Q 3.5 6PGD1_YEAST
19 PsiBlast_PDB 92.0349% -89 - C2 -2P4Q 3.5 6PGD1_YEAST