@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1859: (2016-05-05 )
MSKLQLRAVVADRRLDVEFSVSAGEVLAVLGPNGAGKSTALHVIAGLLRPDAGLVRLGDRVLTDTEAGVNVATHDRRVGLLLQDPLLFPHLSVAKNVAFGPQCRRGMFGSGRARTRASALRWLREVNAEQFADRKPRQLSGGQAQRVAIARALAAEPDVLLLDEPLTGLDVAAAAGIRSVLRSVVARSGCAVVLTTHDLLDVFTLADRVLVLESGTIAEIGPVADVLTAPRSRFGARIAGVNLVNGTIGPDGSLRTQSGAHWYGTPVQDLPTGHEAIAVFPPTAVAVYPEPPHGSPRNIVGLTVAEVDTRGPTVLVRGHDQPGGAPGLAACITVDAATELRVAPGSRVWFSVKAQEVALHPAPHQHASS

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_9(4P33)
LPTB_ECOLI
[Raw transfer]




ATP_A_4(4P33)
LPTB_ECOLI
[Raw transfer]




ATP_A_3(4QC2)
?
[Raw transfer]




ATP_B_5(4QC2)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ADP_B_5(4P32)
LPTB_ECOLI
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_3(4P32)
LPTB_ECOLI
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




112 HHSearch 88.3328%-107 - C1 -3RLF - MALK_ECOLI -
114 HHSearch 88.3233%-108 - C1 -1Z47 - ? -
127 Fugue 87.0330%-114 - C1 -1Z47 - ? -
106 HHSearch 85.5431%-115 - C1 -4TQU - ? -
128 Fugue 82.2926%-107 - C1 -1OXS - ? -
105 HHSearch 81.6330%-112 - C1 -3D31 - ? -
111 HHSearch 80.2728%-103 - C1 -2YYZ - ? -
5 PsiBlast_PDB 80.0729%-115 - C1 -3D31 - ? -
108 HHSearch 78.8629%-107 - C1 -2IT1 - ? -
113 HHSearch 75.4526% -97 - C1 -1OXX - ? -
107 HHSearch 75.1826%-106 - C1 -1V43 - ? -
14 PsiBlast_PDB 73.0636%-122 - C1 -3PUZ - MALK_ECOLI -
26 PsiBlast_CBE 72.0036%-121 - C1 -3PUZ - MALK_ECOLI -
18 PsiBlast_PDB 71.8336%-118 - C1 -3PUX - MALK_ECOLI -
16 PsiBlast_PDB 71.7636%-119 - C1 -3PUV - MALK_ECOLI -
13 PsiBlast_PDB 71.7336%-114 - C1 -3PUY - MALK_ECOLI -
73 PsiBlast_CBE 71.3931%-112 - C1 -3FVQ - FBPC_NEIG1 -
17 PsiBlast_PDB 71.3436%-117 - C1 -3PUW - MALK_ECOLI -
22 PsiBlast_CBE 71.2140%-119 - C1 -1Z47 - ? -
38 PsiBlast_CBE 71.1436%-120 - C1 -2R6G - MALK_ECOLI (first) -
56 PsiBlast_CBE 69.1636%-115 - C1 -4U00 4.4 ?
76 PsiBlast_CBE 65.9433%-109 - C1 -4YMV 3.3 ?
57 PsiBlast_CBE 65.2935%-121 - C1 -3C4J 3.2 ?
66 PsiBlast_CBE 64.2635%-118 - C1 -2OLK 4.3 ?
75 PsiBlast_CBE 63.9733%-111 - C1 -4YMV 4.9 ?
72 PsiBlast_CBE 63.7835%-119 - C1 -3C41 4.8 ?
67 PsiBlast_CBE 63.6535%-119 - C1 -2OLK 4.0 ?
65 PsiBlast_CBE 63.4635%-119 - C1 -2OLK 4.1 ?
58 PsiBlast_CBE 63.3535%-114 - C1 -3C4J 4.4 ?
70 PsiBlast_CBE 63.3035%-119 - C1 -2OLJ 3.9 ?
78 PsiBlast_CBE 63.2333%-108 - C1 -4YMU 4.2 ?
68 PsiBlast_CBE 63.1835%-117 - C1 -2OLK 3.9 ?
60 PsiBlast_CBE 63.1135%-114 - C1 -2Q0H 3.3 ?
77 PsiBlast_CBE 62.9933%-108 - C1 -4YMU 4.8 ?
71 PsiBlast_CBE 62.8035%-121 - C1 -3C41 3.7 ?
59 PsiBlast_CBE 61.6935%-117 - C1 -2Q0H 3.8 ?
69 PsiBlast_CBE 60.1135%-118 - C1 -2OLJ 3.6 ?
96 PsiBlast_CBE 59.0332%-115 - C1 -4P32 4.3 LPTB_ECOLI
98 PsiBlast_CBE 59.0131%-110 - C1 -4P33 5.6 LPTB_ECOLI
95 PsiBlast_CBE 58.9132%-113 - C1 -4P32 4.6 LPTB_ECOLI
97 PsiBlast_CBE 58.8231%-107 - C1 -4P33 5.4 LPTB_ECOLI
85 PsiBlast_CBE 58.7432%-108 - C1 -4QC2 4.9 ?
86 PsiBlast_CBE 56.6932%-107 - C1 -4QC2 5.4 ?
81 PsiBlast_CBE 55.6934%-108 - C1 -1L2T 4.4 Y796_METJA
82 PsiBlast_CBE 55.6534%-106 - C1 -1L2T 4.5 Y796_METJA
84 PsiBlast_CBE 54.8234%-106 - C1 -3TIF 4.3 Y796_METJA
83 PsiBlast_CBE 54.8234%-110 - C1 -3TIF 4.3 Y796_METJA