@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1865c: (2016-05-05 )
MPGRTSIGVKIRDKVQDKVIAITGGARGIGLATAAALHNLGAKVAIGDIDEAMAKESGADLDLDMYGKLDVTDPDSFSGFLDAVERQLGPIDVLVNNAGIMPVGRIVDEPDPVTRRILDINVYGVILGSKLAAQRMVPRGRGHVINVASLAGEIYAVGVATYCASKHAVVAFTDSARLEYRSAGVKFSMVLPSFVNTELIAGTGGIKGFKNAEPADIADAIVGLIVHPKPRVRVTKAAGSMIVAQRFMPRQVSEGLNRLLGGEHVFTDDVDMEKRRTYEARARGEE

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_8(3RSH)
FABG_VIBCH
[Raw transfer]



NDP_A_8(4I08)
FABG_VIBCH
[Raw transfer]



NAD_E_5(1NFF)
HSD_MYCTU
[Raw transfer]



NAP_B_19(3RSH)
FABG_VIBCH
[Raw transfer]



NAD_A_5(3WDS)
?
[Raw transfer]



NAD_A_5(1NFR)
HSD_MYCTU
[Raw transfer]



NAD_G_7(1NFF)
HSD_MYCTU
[Raw transfer]



NAI_G_7(1NFQ)
HSD_MYCTU
[Raw transfer]



NAI_K_11(1NFQ)
HSD_MYCTU
[Raw transfer]



NAP_D_8(3P19)
?
[Raw transfer]



NAI_I_9(1NFQ)
HSD_MYCTU
[Raw transfer]



NAP_A_5(3P19)
?
[Raw transfer]



NAI_E_5(1NFQ)
HSD_MYCTU
[Raw transfer]



NAD_B_10(4WEC)
?
[Raw transfer]



NAD_C_15(4WEC)
?
[Raw transfer]



NAD_D_18(4WEC)
?
[Raw transfer]



NAD_A_5(4WEC)
?
[Raw transfer]



NAI_D_11(4ITU)
?
[Raw transfer]



NDP_D_8(4WK6)
?
[Raw transfer]



NAP_A_5(3TZC)
?
[Raw transfer]



NDP_A_5(4WK6)
?
[Raw transfer]



EDO_B_22(3RRO)
FABG_VIBCH
[Raw transfer]



EDO_A_10(3RRO)
FABG_VIBCH
[Raw transfer]



EDO_A_11(3RRO)
FABG_VIBCH
[Raw transfer]



THJ_A_4(3GED)
?
[Raw transfer]
122 HHSearch 86.8132% -82 - C2 -3WDS 11.1 ?
128 HHSearch 86.2231% -88 - C2 -2D1Y - ? -
115 HHSearch 86.1927% -88 - C2 -4RGB - ? -
129 HHSearch 85.6232% -87 - C2 -2BGK - SILD_PODPE -
123 HHSearch 85.1432% -86 - C2 -4E6P - ? -
4 PsiBlast_PDB 82.9030% -87 - C2 -4NBU - ? -
70 PsiBlast_CBE 81.7433% -82 * C2 *4NBV - ? -
71 PsiBlast_CBE 79.2535% -97 - C2 -3TFO - ? -
81 PsiBlast_CBE 77.4934%-101 - C2 -2EHD - ? -
46 PsiBlast_CBE 76.3933% -88 - C2 -4RF2 - ? -
72 PsiBlast_CBE 76.0835% -93 - C2 -3TFO - ? -
131 HHSearch 75.5428% -81 - C2 -2CFC - HCDR_XANP2 -
82 PsiBlast_CBE 74.6434% -92 - C2 -2EHD - ? -
15 PsiBlast_PDB 74.5734% -91 - C2 -1ZK3 - ? -
47 PsiBlast_CBE 74.0833% -87 - C2 -4RF2 - ? -
118 HHSearch 73.6328% -78 - C2 -2AG5 - BDH2_HUMAN -
132 HHSearch 72.8223% -82 - C2 -3AI3 - ? -
21 PsiBlast_CBE 72.2836% -81 - C2 -1NFQ 9.3 HSD_MYCTU
61 PsiBlast_CBE 72.2733% -94 - C2 -2ZTM - ? -
62 PsiBlast_CBE 72.1233% -95 - C2 -2ZTM - ? -
24 PsiBlast_CBE 72.0436% -81 - C2 -1NFF 9.2 HSD_MYCTU
67 PsiBlast_CBE 70.8334% -89 - C2 -3RSH 11.5 FABG_VIBCH
2 PsiBlast_PDB 70.7436% -82 - C2 -1NFQ 8.6 HSD_MYCTU
3 PsiBlast_PDB 69.9834% -80 - C2 -4WEC 6.9 ?
25 PsiBlast_CBE 69.8934% -79 - C2 -4WEC 9.4 ?
26 PsiBlast_CBE 69.0434% -78 - C2 -4WEC 9.4 ?
22 PsiBlast_CBE 68.9536% -79 - C2 -1NFQ 9.1 HSD_MYCTU
66 PsiBlast_CBE 68.8934% -89 - C2 -3RSH 10.3 FABG_VIBCH
23 PsiBlast_CBE 68.6836% -82 - C2 -1NFQ 8.5 HSD_MYCTU
27 PsiBlast_CBE 68.5034% -82 - C2 -4WEC 8.3 ?
1 PsiBlast_PDB 68.3136% -80 - C2 -1NFF 8.8 HSD_MYCTU
51 PsiBlast_CBE 68.0035% -91 - C2 -4WK6 3.8 ?
68 PsiBlast_CBE 67.9034% -90 - C2 -3RRO 2.6 FABG_VIBCH
5 PsiBlast_PDB 67.8836% -79 - C2 -1NFR 10.6 HSD_MYCTU
78 PsiBlast_CBE 67.0031% -91 - C2 -3P19 11.6 ?
65 PsiBlast_CBE 66.5134% -88 - C2 -4I08 10.3 FABG_VIBCH
69 PsiBlast_CBE 66.1834% -89 - C2 -3RRO 2.9 FABG_VIBCH
77 PsiBlast_CBE 66.1231% -90 - C2 -3P19 12.2 ?
76 PsiBlast_CBE 64.5434% -90 - C2 -3TZC 5.6 ?
48 PsiBlast_CBE 64.0635% -90 - C2 -4WK6 5.6 ?
113 PsiBlast_CBE 38.7934% -61 - C2 -4ITU 7.5 ?