@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1908c: (2016-05-06 )
MPEQHPPITETTTGAASNGCPVVGHMKYPVEGGGNQDWWPNRLNLKVLHQNPAVADPMGAAFDYAAEVATIDVDALTRDIEEVMTTSQPWWPADYGHYGPLFIRMAWHAAGTYRIHDGRGGAGGGMQRFAPLNSWPDNASLDKARRLLWPVKKKYGKKLSWADLIVFAGNCALESMGFKTFGFGFGRVDQWEPDEVYWGKEATWLGDERYSGKRDLENPLAAVQMGLIYVNPEGPNGNPDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTHGAGPADLVGPEPEAAPLEQMGLGWKSSYGTGTGKDAITSGIEVVWTNTPTKWDNSFLEILYGYEWELTKSPAGAWQYTAKDGAGAGTIPDPFGGPGRSPTMLATDLSLRVDPIYERITRRWLEHPEELADEFAKAWYKLIHRDMGPVARYLGPLVPKQTLLWQDPVPAVSHDLVGEAEIASLKSQIRASGLTVSQLVSTAWAAASSFRGSDKRGGANGGRIRLQPQVGWEVNDPDGDLRKVIRTLEEIQESFNSAAPGNIKVSFADLVVLGGCAAIEKAAKAAGHNITVPFTPGRTDASQEQTDVESFAVLEPKADGFRNYLGKGNPLPAEYMLLDKANLLTLSAPEMTVLVGGLRVLGANYKRLPLGVFTEASESLTNDFFVNLLDMGITWEPSPADDGTYQGKDGSGKVKWTGSRVDLVFGSNSELRALVEVYGADDAQPKFVQDFVAAWDKVMNLDRFDVR

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEB_A_2(3WNU)
KATG_SYNE7
[Raw transfer]



HEM_A_2(3WXO)
KATG_SYNE7
[Raw transfer]



HEM_A_2(1UB2)
KATG_SYNE7
[Raw transfer]



HEM_A_2(3WXO)
KATG_SYNE7
[Raw transfer]



HEB_A_2(3X16)
KATG_SYNE7
[Raw transfer]



HEB_A_2(4PAE)
KATG_SYNE7
[Raw transfer]



PEO_A_5(3HDL)
?
[Raw transfer]



ISZ_A_5(2VCN)
?
[Raw transfer]
1 PsiBlast_PDB 98.76100% -74 - C5 -2CCA - KATG_MYCTU -
22 PsiBlast_CBE 98.4899% -75 - C5 -1SJ2 - KATG_MYCTU -
21 PsiBlast_CBE 98.15100% -74 - C5 -2CCA - KATG_MYCTU -
5 PsiBlast_PDB 97.8899% -74 - C5 -4C51 - KATG_MYCTU -
2 PsiBlast_PDB 97.8699% -74 - C5 -1SJ2 - KATG_MYCTU -
25 PsiBlast_CBE 97.7199% -74 - C5 -4C51 - KATG_MYCTU -
24 PsiBlast_CBE 97.4499% -72 - C5 -4C50 - KATG_MYCTU -
4 PsiBlast_PDB 97.3999% -71 - C5 -4C50 - KATG_MYCTU -
3 PsiBlast_PDB 97.3899% -73 - C5 -2CCD - KATG_MYCTU -
76 HHSearch 97.0498% -73 - C5 -2CCA - KATG_MYCTU -
23 PsiBlast_CBE 96.7799% -71 - C5 -2CCD - KATG_MYCTU -
40 PsiBlast_CBE 90.4867% -69 - C5 -2DV1 - KATG_BURPS -
19 PsiBlast_PDB 90.3867% -69 - C5 -2DV1 - KATG_BURPS -
34 PsiBlast_CBE 90.3767% -70 - C5 -2B2Q - KATG_BURPS -
39 PsiBlast_CBE 90.3667% -71 - C5 -3N3S - KATG_BURPS -
35 PsiBlast_CBE 90.3167% -69 - C5 -2B2O - KATG_BURPS -
12 PsiBlast_PDB 90.2867% -71 - C5 -1MWV - KATG_BURPS -
11 PsiBlast_PDB 90.2867% -70 - C5 -4KWQ - ? -
29 PsiBlast_CBE 90.1667% -70 - C5 -3N3N - KATG_BURPS -
38 PsiBlast_CBE 90.1567% -69 - C5 -3N3Q - KATG_BURPS -
72 PsiBlast_CBE 83.0556% -66 - C5 -3WXO 12.6 KATG_SYNE7
74 PsiBlast_CBE 82.9555% -67 - C5 -3X16 12.2 KATG_SYNE7
80 HHSearch 82.8557% -65 - C5 -3WXO 12.6 KATG_SYNE7
71 PsiBlast_CBE 82.7955% -66 - C5 -3WNU 12.6 KATG_SYNE7
73 PsiBlast_CBE 81.9755% -65 - C5 -4PAE 12.0 KATG_SYNE7
75 PsiBlast_CBE 81.8053% -64 - C5 -1UB2 12.1 KATG_SYNE7
91 HHSearch 42.5831% -52 - C5 -2VCN 2.4 ?