@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1925: (2016-05-06 )
MNDGSRQELRVRSGLLQIEDCLDADGGIALPAGTTLISLIERNIKYVGDLVAYRYLDHARSAAGCALEVTWTQFGMRLAAIGAHVQRFAGPGDRVAILAPQGIDYVCGFYAAIKAGTVAVPLFAPELPGHAERLDTALRDSEPAVILTTAAAKNAVEGFLNNVPRLRKPTVLVIDQIPDREGELFVPVEMDIDAVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLNRNTHGVSWLPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPLRWIQALSEGSRTGRVVTAAPNFAYEWAAQRGLPAQGDDVDLSNVVLIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLLVATIDHAAEPTVVYLDPEQLGAGHATRVAPDAPNAVVHVSCGHVARSLWAVIVDPDTGPEAGAELPDGEIGEVWLQGDNVARGYWGRPEETRMTFGARLQSPLAEGSHADGSAIDDTWLRTGDLGVYLDGELYITGRIADLLTIDGRNHYPQDIEATAAEASPMVRRGYITAFTVPASDGDDRNQRLVIIAERAAGTSRSDPRPALDAIRAAVCNRHGLSVADLSFLPAGAIPRTTSGKLARQACRAQYLSGRLGVH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5SV_A_3(5EY9)
FAA32_MYCMM
[Raw transfer]




5SV_B_8(5EY9)
FAA32_MYCMM
[Raw transfer]




5SV_A_3(5EY9)
FAA32_MYCMM
[Raw transfer]




PBK_A_3(3PBK)
?
[Raw transfer]




ATP_A_4(5D6J)
?
[Raw transfer]




ATP_A_4(5D6J)
?
[Raw transfer]




1ZZ_A_2(3KXW)
?
[Raw transfer]




1ZZ_A_2(3KXW)
?
[Raw transfer]




61 Fugue 97.9146%-100 - C3 -5EY9 9.0 FAA32_MYCMM
4 PsiBlast_PDB 97.2845%-104 - C3 -5EY9 9.0 FAA32_MYCMM
27 PsiBlast_CBE 96.8545%-103 - C3 -5EY9 9.4 FAA32_MYCMM
43 HHSearch 96.7848%-102 - C3 -5D6J 8.5 ?
2 PsiBlast_PDB 96.3447%-103 - C3 -5D6J 8.5 ?
25 PsiBlast_CBE 96.1247%-103 - C3 -5EY8 - ? -
22 PsiBlast_CBE 95.8447%-107 - C3 -5EY8 - ? -
1 PsiBlast_PDB 95.7847%-103 - C3 -5EY8 - ? -
24 PsiBlast_CBE 95.6347%-105 - C3 -5EY8 - ? -
26 PsiBlast_CBE 95.4347%-102 - C3 -5EY8 - ? -
3 PsiBlast_PDB 94.9746%-102 - C3 -5ICR - ? -
21 PsiBlast_CBE 94.8547%-106 - C3 -5EY8 - ? -
23 PsiBlast_CBE 94.4047%-103 - C3 -5EY8 - ? -
5 PsiBlast_PDB 84.1344%-104 - C3 -5D6N - ? -
6 PsiBlast_PDB 81.2331% -93 - C3 -3KXW 5.5 ?
58 HHSearch 80.8732% -92 - C3 -3KXW 6.1 ?
7 PsiBlast_PDB 72.1336%-100 - C3 -3T5A - FAA28_MYCTU -
8 PsiBlast_PDB 70.3732% -80 - C3 -3PBK 5.2 ?
55 HHSearch 66.9021% -87 - C3 -4WV3 - ? -
9 PsiBlast_PDB 65.9323% -77 - C3 -4R0M - ? -