@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1928c: (2016-05-06 )
MSVLDLFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGYTCP

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAI_C_8(4NBU)
?
[Raw transfer]



NAI_D_9(4NBU)
?
[Raw transfer]



NAI_A_5(4NBU)
?
[Raw transfer]



NAI_B_6(4NBU)
?
[Raw transfer]



NAD_D_13(3LQF)
?
[Raw transfer]



GOL_C_18(3PK0)
?
[Raw transfer]



GOL_A_9(3PK0)
?
[Raw transfer]



POL_A_8(2WSB)
?
[Raw transfer]



GOL_D_22(3PK0)
?
[Raw transfer]



1SP_D_17(2WDZ)
?
[Raw transfer]



POL_D_18(2WSB)
?
[Raw transfer]



1SP_A_7(2WDZ)
?
[Raw transfer]



EDO_A_12(3RIH)
?
[Raw transfer]



EDO_C_26(3RIH)
?
[Raw transfer]



EDO_A_4(3R1I)
?
[Raw transfer]



1SP_B_11(2WDZ)
?
[Raw transfer]



MRY_D_14(3LQF)
?
[Raw transfer]



1SP_C_14(2WDZ)
?
[Raw transfer]



POL_C_15(2WSB)
?
[Raw transfer]



PG5_C_21(3RIH)
?
[Raw transfer]



POL_B_10(2WSB)
?
[Raw transfer]



PG5_B_14(3RIH)
?
[Raw transfer]



PG5_D_(3RIH)
?
[Raw transfer]



EDO_A_7(4I08)
FABG_VIBCH
[Raw transfer]
132 HHSearch 96.8182%-121 - C1 -3R1I 2.9 ?
1 PsiBlast_PDB 96.5381%-121 - C1 -3R1I - ? -
21 PsiBlast_CBE 91.2881%-124 - C1 -3R1I - ? -
9 PsiBlast_PDB 78.3238%-114 - C1 -4NPC - ? -
32 PsiBlast_CBE 77.7538%-114 - C1 -4NPC - ? -
113 Fugue 76.8535%-121 - C1 -1FMC - HDHA_ECOLI -
8 PsiBlast_PDB 76.5635%-118 - C1 -1VL8 - ? -
142 HHSearch 76.5536%-106 - C1 -3AWD - ? -
31 PsiBlast_CBE 76.3535%-118 - C1 -1VL8 - ? -
130 HHSearch 74.5237%-114 - C1 -3WDS - ? -
103 PsiBlast_CBE 74.3536%-111 - C1 -4RF3 - ? -
74 PsiBlast_CBE 74.2536%-111 - C1 -4G81 - ? -
124 HHSearch 73.8436%-107 - C1 -4G81 - ? -
100 PsiBlast_CBE 73.7536%-105 - C1 -2PNF - FABG_AQUAE -
111 PsiBlast_CBE 73.7436%-109 - C1 -4RF2 - ? -
46 PsiBlast_CBE 73.3341%-106 - C1 -1GEG - BUDC_KLEPN -
73 PsiBlast_CBE 73.1636%-108 - C1 -4G81 - ? -
6 PsiBlast_PDB 73.0838%-103 - C1 -4J2H - ? -
76 PsiBlast_CBE 73.0736%-109 - C1 -4G81 - ? -
5 PsiBlast_PDB 73.0240%-101 - C1 -3GDG - MTDH_DAVTA -
19 PsiBlast_PDB 70.1936% -99 - C1 -2WSB 3.6 ?
58 PsiBlast_CBE 69.4336%-100 - C1 -2WSB 3.1 ?
60 PsiBlast_CBE 69.2636%-102 - C1 -2WDZ 2.4 ?
22 PsiBlast_CBE 68.9538% -97 - C1 -3PK0 2.8 ?
96 PsiBlast_CBE 68.8837%-105 - C1 -3RIH 2.5 ?
62 PsiBlast_CBE 68.7036% -99 - C1 -2WDZ 3.5 ?
94 PsiBlast_CBE 68.6437%-105 - C1 -3RIH 3.6 ?
3 PsiBlast_PDB 68.4738% -97 - C1 -3PK0 2.8 ?
95 PsiBlast_CBE 68.4337%-104 - C1 -3RIH 2.0 ?
93 PsiBlast_CBE 68.3537%-104 - C1 -3RIH 1.6 ?
59 PsiBlast_CBE 68.2736% -99 - C1 -2WSB 3.1 ?
57 PsiBlast_CBE 68.0236% -99 - C1 -2WSB 3.3 ?
61 PsiBlast_CBE 67.8236% -96 - C1 -2WDZ 3.4 ?
54 PsiBlast_CBE 67.6336% -96 - C1 -3LQF 10.4 ?
23 PsiBlast_CBE 67.5738% -98 - C1 -3PK0 2.8 ?
12 PsiBlast_PDB 67.1740%-102 - C1 -4NBU 11.1 ?
40 PsiBlast_CBE 66.9040%-101 - C1 -4NBU 11.4 ?
64 PsiBlast_CBE 66.6136%-104 - C1 -4I08 3.0 FABG_VIBCH
41 PsiBlast_CBE 66.1640%-101 - C1 -4NBU 11.4 ?
39 PsiBlast_CBE 66.1040%-101 - C1 -4NBU 11.4 ?
17 PsiBlast_PDB 65.7036% -97 - C1 -2WDZ 2.4 ?