@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1997: (2016-05-06 )
MSASVSATTAHHGLPAHEVVLLLESDPYHGLSDGEAAQRLERFGPNTLAVVTRASLLARILRQFHHPLIYVLLVAGTITAGLKEFVDAAVIFGVVVINAIVGFIQESKAEAALQGLRSMVHTHAKVVREGHEHTMPSEELVPGDLVLLAAGDKVPADLRLVRQTGLSVNESALTGESTPVHKDEVALPEGTPVADRRNIAYSGTLVTAGHGAGIVVATGAETELGEIHRLVGAAEVVATPLTAKLAWFSKFLTIAILGLAALTFGVGLLRRQDAVETFTAAIALAVGAIPEGLPTAVTITLAIGMARMAKRRAVIRRLPAVETLGSTTVICADKTGTLTENQMTVQSIWTPHGEIRATGTGYAPDVLLCDTDDAPVPVNANAALRWSLLAGACSNDAALVRDGTRWQIVGDPTEGAMLVVAAKAGFNPERLATTLPQVAAIPFSSERQYMATLHRDGTDHVVLAKGAVERMLDLCGTEMGADGALRPLDRATVLRATEMLTSRGLRVLATGMGAGAGTPDDFDENVIPGSLALTGLQAMSDPPRAAAASAVAACHSAGIAVKMITGDHAGTATAIATEVGLLDNTEPAAGSVLTGAELAALSADQYPEAVDTASVFARVSPEQKLRLVQALQARGHVVAMTGDGVNDAPALRQANIGVAMGRGGTEVAKDAADMVLTDDDFATIEAAVEEGRGVFDNLTKFITWTLPTNLGEGLVILAAIAVGVALPILPTQILWINMTTAIALGLMLAFEPKEAGIMTRPPRDPDQPLLTGWLVRRTLLVSTLLVASAWWLFAWELDNGAGLHEARTAALNLFVVVEAFYLFSCRSLTRSAWRLGMFANRWIILGVSAQAIAQFAITYLPAMNMVFDTAPIDIGVWVRIFAVATAITIVVATDTLLPRIRAQPP

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TM1_A_4(3AR5)
AT2A1_RABIT
[Raw transfer]




TBU_A_6(4UU0)
AT2A1_RABIT
[Raw transfer]




ACP_A_6(3N8G)
AT2A1_RABIT
[Raw transfer]




ACP_A_6(1T5S)
AT2A1_RABIT
[Raw transfer]




ACP_A_6(3TLM)
AT2A1_BOVIN
[Raw transfer]




ADP_A_8(1T5T)
AT2A1_RABIT
[Raw transfer]




ACP_A_5(4XOU)
AT2A1_RABIT
[Raw transfer]




TM1_A_5(3W5B)
AT2A1_RABIT
[Raw transfer]




ADP_A_5(3FPS)
AT2A1_RABIT
[Raw transfer]




ADP_A_4(2OA0)
AT2A1_RABIT
[Raw transfer]




ACP_A_3(2C8K)
AT2A1_RABIT
[Raw transfer]




ACP_A_3(2BY4)
AT2A1_RABIT
[Raw transfer]




ACP_A_3(2C88)
AT2A1_RABIT
[Raw transfer]




ACP_A_4(3AR2)
?
[Raw transfer]




ADP_A_7(2ZBD)
?
[Raw transfer]




128_A_4(3AR7)
AT2A1_RABIT
[Raw transfer]




MF4_A_4(2O9J)
AT2A1_RABIT
[Raw transfer]




MF4_A_3(3FPB)
AT2A1_RABIT
[Raw transfer]




12D_A_5(3AR6)
AT2A1_RABIT
[Raw transfer]




ACP_A_8(4UU1)
AT2A1_RABIT
[Raw transfer]




3 PsiBlast_PDB 92.8733% -98 - C1 -4YCM - AT2A1_RABIT -
4 PsiBlast_PDB 92.7933% -96 - C1 -4YCN - AT2A1_RABIT -
58 PsiBlast_CBE 92.4833% -93 - C1 -2YFY - ? -
13 PsiBlast_PDB 92.0333% -95 - C1 -2AGV - AT2A1_RABIT -
64 PsiBlast_CBE 92.0133% -95 - C1 -2AGV - AT2A1_RABIT -
111 HHSearch 91.9132% -87 - C1 -2ZXE - ? -
26 PsiBlast_CBE 91.8133% -94 - C1 -4J2T - AT2A1_RABIT -
59 PsiBlast_CBE 91.7533% -94 - C1 -2EAU - AT2A1_RABIT -
7 PsiBlast_PDB 91.5933% -96 - C1 -1SU4 - AT2A1_RABIT -
32 PsiBlast_CBE 91.5733% -94 - C1 -3NAM - ? -
31 PsiBlast_CBE 91.5533% -95 - C1 -3NAN - ? -
16 PsiBlast_PDB 91.5233% -95 - C1 -2C8K 3.5 AT2A1_RABIT
66 PsiBlast_CBE 91.4833% -92 - C1 -1WPG - AT2A1_RABIT -
67 PsiBlast_CBE 91.3933% -92 - C1 -1WPG - AT2A1_RABIT -
15 PsiBlast_PDB 91.3833% -95 - C1 -2C88 3.8 AT2A1_RABIT
1 PsiBlast_PDB 91.2733% -96 - C1 -3W5B 5.7 AT2A1_RABIT
33 PsiBlast_CBE 91.2633% -94 - C1 -3NAL - ? -
35 PsiBlast_CBE 91.2333% -91 - C1 -3N5K - ? -
40 PsiBlast_CBE 91.0833% -92 - C1 -3FGO - ? -
23 PsiBlast_CBE 91.0233% -91 - C1 -4XOU 7.2 AT2A1_RABIT
38 PsiBlast_CBE 90.3133% -93 - C1 -3FPS 4.6 AT2A1_RABIT
9 PsiBlast_PDB 90.2733% -92 - C1 -1T5T 6.4 AT2A1_RABIT
34 PsiBlast_CBE 89.9633% -91 - C1 -3N8G 6.7 AT2A1_RABIT
20 PsiBlast_PDB 89.9633% -94 - C1 -2OA0 4.2 AT2A1_RABIT
14 PsiBlast_PDB 89.7633% -93 - C1 -2BY4 4.1 AT2A1_RABIT
8 PsiBlast_PDB 89.5133% -92 - C1 -1T5S 7.1 AT2A1_RABIT
71 PsiBlast_CBE 89.4333% -92 - C1 -3TLM 6.6 AT2A1_BOVIN
39 PsiBlast_CBE 88.3933% -93 - C1 -3FPB 2.9 AT2A1_RABIT
19 PsiBlast_PDB 88.2733% -92 - C1 -2O9J 2.8 AT2A1_RABIT
25 PsiBlast_CBE 73.2033% -39 - C1 -4UU0 Error AT2A1_RABIT
49 PsiBlast_CBE 73.1333% -39 - C1 -3AR5 Error AT2A1_RABIT
52 PsiBlast_CBE 70.8833% -46 - C1 -3AR2 3.4 ?
57 PsiBlast_CBE 70.6033% -45 - C1 -2ZBD 2.2 ?
48 PsiBlast_CBE 69.6633% -40 - C1 -3AR6 3.8 AT2A1_RABIT
24 PsiBlast_CBE 69.4533% -40 - C1 -4UU1 3.3 AT2A1_RABIT
47 PsiBlast_CBE 69.2333% -39 - C1 -3AR7 2.3 AT2A1_RABIT