@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2027c: (2016-05-07 )
MTHPDRANVNPGSPPLRETLSQLRLRELLLEVQDRIEQIVEGRDRLDGLIDAILAITSGLKLDATLRAIVHTAAELVDARYGALGVRGYDHRLVEFVYEGIDEETRHLIGSLPEGRGVLGALIEEPKPIRLDDISRHPASVGFPLHHPPMRTFLGVPVRIRDEVFGNLYLTEKADGQPFSDDDEVLVQALAAAAGIAVDNARLFEESRTREAWIEATRDIGTQMLAGADPAMVFRLIAEEALTLMAGAATLVAVPLDDEAPACEVDDLVIVEVAGEISPAVKQMTVAVSGTSIGGVFHDRTPRRFDRLDLAVDGPVEPGPALVLPLRAADTVAGVLVALRSADEQPFSDKQLDMMAAFADQAALAWRLATAQRQMREVEILTDRDRIARDLHDHVIQRLFAVGLTLQGAAPRARVPAVRESIYSSIDDLQEIIQEIRSAIFDLHAGPSRATGLRHRLDKVIDQLAIPALHTTVQYTGPLSVVDTVLANHAEAVLREAVSNAVRHANATSLAINVSVEDDVRVEVVDDGVGISGDITESGLRNLRQRADDAGGEFTVENMPTGGTLLRWSAPLR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEM_A_3(2VZW)
DOST_MYCTU
[Raw transfer]




HEM_B_5(2VZW)
DOST_MYCTU
[Raw transfer]




HEM_B_5(4YNR)
?
[Raw transfer]




HEM_A_3(2W3D)
DEVS_MYCTU
[Raw transfer]




HEM_A_3(4YOF)
?
[Raw transfer]




HEM_A_3(2Y8H)
?
[Raw transfer]




HEM_B_6(2W3H)
DEVS_MYCTU
[Raw transfer]




HEM_A_3(2Y79)
DEVS_MYCTU
[Raw transfer]




HEM_B_5(4YOF)
?
[Raw transfer]




HEM_B_5(2W3E)
DEVS_MYCTU
[Raw transfer]




HEM_A_3(2W3H)
DEVS_MYCTU
[Raw transfer]




HEM_B_5(2Y8H)
?
[Raw transfer]




HEM_B_5(2W3D)
DEVS_MYCTU
[Raw transfer]




HEM_A_3(2W3G)
DEVS_MYCTU
[Raw transfer]




HEM_B_5(2W3G)
DEVS_MYCTU
[Raw transfer]




HEM_A_3(2W3F)
DEVS_MYCTU
[Raw transfer]




HEM_B_6(2Y79)
DEVS_MYCTU
[Raw transfer]




HEM_A_3(2W3E)
DEVS_MYCTU
[Raw transfer]




HEM_B_4(2W3F)
DEVS_MYCTU
[Raw transfer]




HEM_A_3(4YNR)
?
[Raw transfer]




CMO_B_6(4YNR)
?
[Raw transfer]




CMO_A_4(4YNR)
?
[Raw transfer]




1 PsiBlast_PDB 86.99100%-103 - C1 -2VZW 13.5 DOST_MYCTU
21 PsiBlast_CBE 82.83100% -89 - C1 -2VZW 13.5 DOST_MYCTU
7 PsiBlast_PDB 77.2372% -90 - C1 -2W3G 13.9 DEVS_MYCTU
6 PsiBlast_PDB 76.4472% -91 - C1 -2W3F 13.6 DEVS_MYCTU
5 PsiBlast_PDB 76.3972% -94 - C1 -2W3E 14.0 DEVS_MYCTU
26 PsiBlast_CBE 76.0572% -87 - C1 -2W3G 13.6 DEVS_MYCTU
28 PsiBlast_CBE 76.0072% -86 - C1 -2W3E 13.5 DEVS_MYCTU
4 PsiBlast_PDB 75.9172% -91 - C1 -2Y79 14.2 DEVS_MYCTU
23 PsiBlast_CBE 75.6473% -88 - C1 -2Y8H 13.5 ?
3 PsiBlast_PDB 75.3573% -90 - C1 -2Y8H 13.8 ?
24 PsiBlast_CBE 75.3172% -86 - C1 -2Y79 13.9 DEVS_MYCTU
25 PsiBlast_CBE 74.6572% -85 - C1 -2W3H 14.0 DEVS_MYCTU
29 PsiBlast_CBE 74.5272% -91 - C1 -4YOF 13.9 ?
27 PsiBlast_CBE 74.3872% -88 - C1 -2W3F 13.7 DEVS_MYCTU
11 PsiBlast_PDB 74.2972% -89 - C1 -2W3D 13.9 DEVS_MYCTU
30 PsiBlast_CBE 74.1372% -88 - C1 -4YNR 14.1 ?
8 PsiBlast_PDB 73.3672% -83 - C1 -2W3H 13.7 DEVS_MYCTU
9 PsiBlast_PDB 73.1372% -90 - C1 -4YNR 14.0 ?
31 PsiBlast_CBE 73.0872% -89 - C1 -2W3D 13.7 DEVS_MYCTU
10 PsiBlast_PDB 72.4272% -86 - C1 -4YOF 13.9 ?