@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2043c: (2016-05-07 )
MRALIIVDVQNDFCEGGSLAVTGGAALARAISDYLAEAADYHHVVATKDFHIDPGDHFSGTPDYSSSWPPHCVSGTPGADFHPSLDTSAIEAVFYKGAYTGAYSGFEGVDENGTPLLNWLRQRGVDEVDVVGIATDHCVRQTAEDAVRNGLATRVLVDLTAGVSADTTVAALEEMRTASVELVCSS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NIO_B_8(3R2J)
?
[Raw transfer]



NIO_C_11(3R2J)
?
[Raw transfer]



NIO_D_13(3R2J)
?
[Raw transfer]



NIO_A_6(3R2J)
?
[Raw transfer]



NIO_A_6(3R2J)
?
[Raw transfer]



NIO_B_11(2WT9)
?
[Raw transfer]



VGL_A_3(2WTA)
?
[Raw transfer]



NIO_A_6(2WT9)
?
[Raw transfer]



NIO_A_6(2WT9)
?
[Raw transfer]
45 HHSearch 92.47100%-116 * C4 *3PL1 - ? -
1 PsiBlast_PDB 92.47100%-116 - C4 -3PL1 - ? -
36 Fugue 77.2733%-109 - C4 -2H0R - PNC1_YEAST -
7 PsiBlast_PDB 76.1130%-108 - C4 -2H0R - PNC1_YEAST -
5 PsiBlast_PDB 75.5536%-106 - C4 -2WTA 2.0 ?
3 PsiBlast_PDB 75.1137%-112 - C4 -1ILW - ? -
4 PsiBlast_PDB 75.0136%-105 - C4 -2WT9 3.3 ?
8 PsiBlast_PDB 74.4130%-106 - C4 -3V8E - PNC1_YEAST -
23 PsiBlast_CBE 74.3542%-109 - C4 -3R2J 3.4 ?
21 PsiBlast_CBE 74.2236%-106 - C4 -2WT9 2.8 ?
2 PsiBlast_PDB 73.9737%-113 - C4 -1IM5 - ? -
58 HHSearch 73.6834%-100 - C4 -3V8E - PNC1_YEAST -
24 PsiBlast_CBE 73.6242%-111 - C4 -3R2J 3.2 ?
6 PsiBlast_PDB 73.4042%-116 - C4 -3R2J 3.0 ?
22 PsiBlast_CBE 72.5742%-110 - C4 -3R2J 3.3 ?
57 HHSearch 72.1837% -97 - C4 -2WT9 2.5 ?
48 HHSearch 70.8539%-109 - C4 -1IM5 - ? -
56 HHSearch 69.4940%-111 - C4 -3R2J 3.0 ?
59 HHSearch 66.0429%-108 - C4 -3O94 - ? -
46 HHSearch 65.8429%-111 - C4 -3HB7 - ? -