@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2152c: (2016-05-08 )
MSTEQLPPDLRRVHMVGIGGAGMSGIARILLDRGGLVSGSDAKESRGVHALRARGALIRIGHDASSLDLLPGGATAVVTTHAAIPKTNPELVEARRRGIPVVLRPAVLAKLMAGRTTLMVTGTHGKTTTTSMLIVALQHCGLDPSFAVGGELGEAGTNAHHGSGDCFVAEADESDGSLLQYTPHVAVITNIESDHLDFYGSVEAYVAVFDSFVERIVPGGALVVCTDDPGGAALAQRATELGIRVLRYGSVPGETMAATLVSWQQQGVGAVAHIRLASELATAQGPRVMRLSVPGRHMALNALGALLAAVQIGAPADEVLDGLAGFEGVRRRFELVGTCGVGKASVRVFDDYAHHPTEISATLAAARMVLEQGDGGRCMVVFQPHLYSRTKAFAAEFGRALNAADEVFVLDVYGAREQPLAGVSGASVAEHVTVPMRYVPDFSAVAQQVAAAASPGDVIVTMGAGDVTLLGPEILTALRVRANRSAPGRPGVLG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_3(1GQY)
MURC_HAEIN
[Raw transfer]



ACP_B_5(1GQY)
MURC_HAEIN
[Raw transfer]



ANP_A_8(1P3D)
MURC_HAEIN
[Raw transfer]



ADP_A_3(4BUB)
MURE_THEMA
[Raw transfer]



AMP_A_3(4HV4)
MURC_YERPE
[Raw transfer]



AMP_A_3(4HV4)
MURC_YERPE
[Raw transfer]



AMP_B_5(4HV4)
MURC_YERPE
[Raw transfer]



GOL_A_14(4BUC)
MURD_THEMA
[Raw transfer]



UMA_A_7(1P3D)
MURC_HAEIN
[Raw transfer]



UMA_A_7(1P3D)
MURC_HAEIN
[Raw transfer]



EPU_A_7(1P31)
MURC_HAEIN
[Raw transfer]
26 HHSearch 96.9038%-107 - C1 -4HV4 7.6 MURC_YERPE
4 PsiBlast_PDB 96.4737%-108 - C1 -1P3D 9.6 MURC_HAEIN
3 PsiBlast_PDB 96.3637%-111 - C1 -1P31 5.9 MURC_HAEIN
2 PsiBlast_PDB 96.0837%-113 - C1 -4HV4 7.6 MURC_YERPE
22 PsiBlast_CBE 95.5037%-109 - C1 -4HV4 7.0 MURC_YERPE
21 PsiBlast_CBE 95.4237%-110 - C1 -1GQY 9.8 MURC_HAEIN
25 HHSearch 94.7037%-106 - C1 -1P3D 4.1 MURC_HAEIN
1 PsiBlast_PDB 94.2337%-111 * C1 *1GQY 9.5 MURC_HAEIN
5 PsiBlast_PDB 91.6035%-101 - C1 -2F00 - MURC_ECOLI -
8 PsiBlast_PDB 71.9530%-117 - C1 -3EAG - ? -
29 HHSearch 71.8123% -93 - C1 -3LK7 - MURD_STRA5 -
40 HHSearch 70.1628%-112 - C1 -3EAG - ? -
35 HHSearch 67.8023%-106 - C1 -3ZL8 - ? -
27 HHSearch 65.5018%-106 - C1 -4BUC 2.8 MURD_THEMA
36 HHSearch 65.2125%-107 - C1 -4BUB 5.7 MURE_THEMA
14 PsiBlast_PDB 64.3725% -92 - C1 -3ZL8 - ? -
34 HHSearch 63.6820%-101 - C1 -4QDI - ? -
38 HHSearch 63.4520%-115 - C1 -3ZM6 - ? -
31 HHSearch 63.2224%-119 - C1 -4CVK - ? -
44 HHSearch 62.8716%-102 - C1 -1O5Z - ? -