@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2173: (2016-05-08 )
MAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IPE_A_4(3QQV)
?
[Raw transfer]



IPR_A_12(1RQI)
ISPA_ECOLI
[Raw transfer]



IPR_A_9(1RQJ)
ISPA_ECOLI
[Raw transfer]



DMA_A_6(4GP2)
?
[Raw transfer]



GOL_A_2(3LK5)
?
[Raw transfer]



GOL_A_2(3LK5)
?
[Raw transfer]



DMA_A_3(4GP1)
?
[Raw transfer]



GOL_A_5(3Q2Q)
?
[Raw transfer]



CIT_A_3(3PKO)
?
[Raw transfer]



RIS_A_7(1YHL)
?
[Raw transfer]



RIS_A_10(1RQJ)
ISPA_ECOLI
[Raw transfer]



RIS_B_12(1RQJ)
ISPA_ECOLI
[Raw transfer]



IPE_A_5(3QQV)
?
[Raw transfer]



POP_A_3(3OYR)
?
[Raw transfer]



DST_B_9(1RQI)
ISPA_ECOLI
[Raw transfer]
2 PsiBlast_PDB 93.7742% -81 - C1 -3QQV 4.0 ?
1 PsiBlast_PDB 90.6042% -91 - C1 -3LK5 3.0 ?
32 HHSearch 86.5344% -97 - C1 -3LK5 3.0 ?
39 HHSearch 70.5429% -87 * C1 *1WY0 - ? -
52 HHSearch 69.2323% -86 - C1 -4KK2 - CHRDS_ARTSI (first) -
18 PsiBlast_PDB 69.1824% -87 - C1 -4KK2 - CHRDS_ARTSI (first) -
4 PsiBlast_PDB 68.7729% -89 - C1 -4DHD - ? -
5 PsiBlast_PDB 68.5329% -90 - C1 -4GP1 4.4 ?
49 HHSearch 68.2125% -85 - C1 -3NF2 - ? -
6 PsiBlast_PDB 68.1729% -87 - C1 -4GP2 3.7 ?
45 HHSearch 66.5431% -85 - C1 -4DHD - ? -
9 PsiBlast_PDB 66.2627% -85 - C1 -3LMD - ? -
10 PsiBlast_PDB 65.4527% -84 - C1 -3Q2Q 1.8 ?
38 HHSearch 65.0928% -92 - C1 -3LMD - ? -
33 HHSearch 64.9626% -89 - C1 -4LOB - ? -
34 HHSearch 63.2329%-105 - C1 -3OYR - ? -
62 Fugue 63.1425% -93 - C1 -3OYR - ? -
14 PsiBlast_PDB 62.5130% -92 - C1 -3OYR 3.4 ?
46 HHSearch 62.4123% -69 - C1 -1UBY - FPPS_CHICK -
37 HHSearch 61.7529% -69 - C1 -1WMW - ? -
22 PsiBlast_CBE 29.8631% -38 - C1 -1RQI 4.1 ISPA_ECOLI
21 PsiBlast_CBE 29.8231% -40 - C1 -1RQI 2.8 ISPA_ECOLI
24 PsiBlast_CBE 27.9731% -34 - C1 -1RQJ 4.8 ISPA_ECOLI
23 PsiBlast_CBE 27.0131% -37 - C1 -1RQJ 3.1 ISPA_ECOLI