@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2176: (2016-05-08 )
MVEAGTRDPLESALLDSRYLVQAKIASGGTSTVYRGLDVRLDRPVALKVMDSRYAGDEQFLTRFRLEARAVARLNNRALVAVYDQGKDGRHPFLVMELIEGGTLRELLIERGPMPPHAVVAVLRPVLGGLAAAHRAGLVHRDVKPENILISDDGDVKLADFGLVRAVAAASITSTGVILGTAAYLSPEQVRDGNADPRSDVYSVGVLVYELLTGHTPFTGDSALSIAYQRLDADVPRASAVIDGVPPQFDELVACATARNPADRYADAIAMGADLEAIAEELALPEFRVPAPRNSAQHRSAALYRSRITQQGQLGAKPVHHPTRQLTRQPGDCSEPASGSEPEHEPITGQFAGIAIEEFIWARQHARRMVLVWVSVVLAITGLVASAAWTIGSNLSGLL

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_2(1O6Y)
PKNB_MYCTU
[Raw transfer]



AGS_A_2(3ORM)
?
[Raw transfer]



AGS_A_2(3ORO)
?
[Raw transfer]



AGS_A_2(3ORP)
?
[Raw transfer]



ANP_A_2(4BL1)
MELK_HUMAN
[Raw transfer]



AGS_A_2(3ORT)
?
[Raw transfer]



AGS_A_2(3ORK)
?
[Raw transfer]



ADP_A_2(3F61)
PKNB_MYCTU
[Raw transfer]



GVD_B_8(2VN9)
KCC2D_HUMAN
[Raw transfer]



5CP_B_6(3BHH)
KCC2B_HUMAN
[Raw transfer]



GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]



5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]



FEF_A_3(2VZ6)
KCC2A_HUMAN
[Raw transfer]



DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]



ANP_A_7(3LIJ)
?
[Raw transfer]



GOL_A_9(3HZT)
?
[Raw transfer]



MIX_G_7(2FUM)
PKNB_MYCTU
[Raw transfer]



MIX_E_5(2FUM)
PKNB_MYCTU
[Raw transfer]



1WU_A_3(4L6Q)
ROCK2_HUMAN
[Raw transfer]



1WU_B_4(4L6Q)
ROCK2_HUMAN
[Raw transfer]



J60_A_7(3HZT)
?
[Raw transfer]



EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]



EDO_A_6(2WEL)
KCC2D_HUMAN
[Raw transfer]



EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]
21 PsiBlast_CBE 87.4745% -98 - C1 -2FUM 4.2 PKNB_MYCTU
9 PsiBlast_PDB 86.6141% -93 - C1 -4OW8 - PKNA_MYCTU -
1 PsiBlast_PDB 86.1845% -97 - C1 -1O6Y 5.0 PKNB_MYCTU
2 PsiBlast_PDB 85.2045% -89 - C1 -2FUM 3.7 PKNB_MYCTU
3 PsiBlast_PDB 82.9344% -93 - C1 -3ORK 5.2 ?
8 PsiBlast_PDB 81.0444% -93 - C1 -3F61 4.7 PKNB_MYCTU
5 PsiBlast_PDB 80.7244% -86 - C1 -3ORP 5.2 ?
4 PsiBlast_PDB 80.6444% -89 - C1 -3ORO 6.9 ?
22 PsiBlast_CBE 79.4134%-103 - C1 -4EQM - ? -
24 PsiBlast_CBE 78.9934%-103 - C1 -4EQM - ? -
23 PsiBlast_CBE 78.9734%-101 - C1 -4EQM - ? -
7 PsiBlast_PDB 78.9244% -94 - C1 -3ORM 6.3 ?
6 PsiBlast_PDB 78.5544% -86 - C1 -3ORT 5.1 ?
10 PsiBlast_PDB 77.7834% -95 - C1 -4EQM - ? -
25 PsiBlast_CBE 77.7434% -95 - C1 -4EQM - ? -
26 PsiBlast_CBE 77.2934% -96 - C1 -4EQM - ? -
67 PsiBlast_CBE 72.3531% -91 - C1 -2WEL 3.3 KCC2D_HUMAN
66 PsiBlast_CBE 71.7731% -91 - C1 -2VN9 5.2 KCC2D_HUMAN
65 PsiBlast_CBE 70.1231% -88 - C1 -2VN9 5.3 KCC2D_HUMAN
17 PsiBlast_PDB 68.3630% -84 - C1 -2VZ6 3.8 KCC2A_HUMAN
29 PsiBlast_CBE 66.1531% -95 - C1 -3BHH 5.7 KCC2B_HUMAN
30 PsiBlast_CBE 64.0431% -94 - C1 -3BHH 4.8 KCC2B_HUMAN
68 PsiBlast_CBE 42.4431%-103 - C1 -3LIJ 3.7 ?
71 PsiBlast_CBE 36.9334% -93 - C1 -4L6Q 3.7 ROCK2_HUMAN
70 PsiBlast_CBE 34.9134% -85 - C1 -4L6Q 4.1 ROCK2_HUMAN
69 PsiBlast_CBE 28.4634% -99 - C1 -3HZT 3.7 ?