@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2178c: (2016-05-08 )
MNWTVDIPIDQLPSLPPLPTDLRTRLDAALAKPAAQQPTWPADQALAMRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQGGDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQYAKPRSADIDALGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALTSSGLASLHLVHDWNREFVRTSPAGARYEALATEIDRGLRFMSACGVADRNLQTAEIYASHEALVLDYERAMLRLSDGDDGEPQLFDLSAHTVWIGERTRQIDGAHIAFAQVIANPVGVKLGPNMTPELAVEYVERLDPHNKPGRLTLVSRMGNHKVRDLLPPIVEKVQATGHQVIWQCDPMHGNTHESSTGFKTRHFDRIVDEVQGFFEVHRALGTHPGGIHVEITGENVTECLGGAQDISETDLAGRYETACDPRLNTQQSLELAFLVAEMLRD

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

036_B_7(3PFP)
AROG_MYCTU
[Raw transfer]



035_A_4(3PFP)
AROG_MYCTU
[Raw transfer]



PEP_A_7(2B7O)
AROG_MYCTU
[Raw transfer]



PEP_A_7(3NV8)
AROG_MYCTU
[Raw transfer]



GOL_A_11(3RZI)
AROG_MYCTU
[Raw transfer]



GOL_B_13(2W1A)
AROG_MYCTU
[Raw transfer]



GOL_A_11(3RZI)
AROG_MYCTU
[Raw transfer]



G3P_A_5(1OF8)
AROG_YEAST
[Raw transfer]
29 PsiBlast_CBE 98.44100% -95 - C6 -2YPP - AROG_MYCTU -
30 PsiBlast_CBE 97.72100% -93 - C6 -2YPO - AROG_MYCTU -
23 PsiBlast_CBE 97.67100% -93 - C6 -3NV8 - AROG_MYCTU -
22 PsiBlast_CBE 97.40100% -90 - C6 -3PFP 8.2 AROG_MYCTU
4 PsiBlast_PDB 97.23100% -90 - C6 -3PFP 7.3 AROG_MYCTU
27 PsiBlast_CBE 97.03100% -92 - C6 -3RZI - AROG_MYCTU -
5 PsiBlast_PDB 97.03100% -90 - C6 -5EX4 - AROG_MYCTU -
21 PsiBlast_CBE 97.00100% -92 - C6 -5EX4 - AROG_MYCTU -
7 PsiBlast_PDB 96.81100% -91 - C6 -2YPO - AROG_MYCTU -
32 PsiBlast_CBE 96.80100% -94 - C6 -5CKV - AROG_MYCTU -
26 PsiBlast_CBE 96.79100% -93 - C6 -3KGF - AROG_MYCTU -
8 PsiBlast_PDB 96.79100% -93 - C6 -2YPP - AROG_MYCTU -
28 PsiBlast_CBE 96.62100% -92 - C6 -2YPQ - AROG_MYCTU -
1 PsiBlast_PDB 96.60100% -93 - C6 -3KGF - AROG_MYCTU -
33 PsiBlast_CBE 96.56100% -95 - C6 -2W1A 1.9 AROG_MYCTU
6 PsiBlast_PDB 96.36100% -90 - C6 -3RZI 2.2 AROG_MYCTU
11 PsiBlast_PDB 96.16100% -93 - C6 -2W1A - AROG_MYCTU -
31 PsiBlast_CBE 96.10100% -93 - C6 -5CKX - ? -
3 PsiBlast_PDB 95.51100% -91 - C6 -3NV8 3.3 AROG_MYCTU
13 PsiBlast_PDB 95.41100% -91 - C6 -5CKX - ? -
14 PsiBlast_PDB 95.2397% -97 - C6 -2B7O 3.8 AROG_MYCTU
35 HHSearch 95.2298% -88 - C6 -3RZI 2.2 AROG_MYCTU