@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2202c: (2016-05-08 )
MTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVLGGEVALVGAAGADFADYRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLADVVSAIGKPELVIIGANDPEAMFLHTEECRKLGLAFAADPSQQLARLSGEEIRRLVNGAAYLFTNDYEWDLLLSKTGWSEADVMAQIDLRVTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGSLVAVLVLESTGTQEWQWDYEAAASRLAGAYGEHAAAEIVAVLA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2FA_A_2(4UBE)
ADOK_MYCBO
[Raw transfer]




2FA_A_2(2PKK)
ADOK_MYCTU
[Raw transfer]




MZR_B_6(3B1N)
?
[Raw transfer]




MZR_A_3(3B1N)
?
[Raw transfer]




MZR_A_3(3B1N)
?
[Raw transfer]




NOS_A_2(3B1P)
?
[Raw transfer]




HO4_A_2(4PVV)
ADOK_MYCTU
[Raw transfer]




AGS_A_3(4O1G)
ADOK_MYCTU
[Raw transfer]




ACP_A_2(2PKN)
ADOK_MYCTU
[Raw transfer]




4 PsiBlast_PDB 99.56100%-112 - C2 -4UBE 7.6 ADOK_MYCBO
64 HHSearch 99.19100%-114 - C2 -2PKF - ADOK_MYCTU -
1 PsiBlast_PDB 99.19100%-114 - C2 -2PKF - ADOK_MYCTU -
2 PsiBlast_PDB 98.91100%-111 - C2 -2PKK 7.3 ADOK_MYCTU
3 PsiBlast_PDB 98.67100%-113 - C2 -2PKN 5.7 ADOK_MYCTU
5 PsiBlast_PDB 98.65100%-113 - C2 -4O1G 6.8 ADOK_MYCTU
6 PsiBlast_PDB 95.1599%-111 - C2 -4PVV 6.5 ADOK_MYCTU
9 PsiBlast_PDB 71.4235% -96 - C2 -3B1P 6.9 ?
27 PsiBlast_CBE 71.3335% -97 - C2 -3B1R - ? -
22 PsiBlast_CBE 71.2335% -99 - C2 -3B1Q - ? -
23 PsiBlast_CBE 71.1835% -96 - C2 -3B1Q - ? -
8 PsiBlast_PDB 71.1635% -98 - C2 -3B1O - ? -
65 HHSearch 70.9335% -94 - C2 -3B1N 4.7 ?
25 PsiBlast_CBE 70.8535% -98 - C2 -3B1N 5.0 ?
10 PsiBlast_PDB 70.6535% -97 - C2 -3B1Q - ? -
29 PsiBlast_CBE 70.6335% -95 - C2 -3B1R - ? -
26 PsiBlast_CBE 70.5035% -95 - C2 -3B1R - ? -
7 PsiBlast_PDB 70.4435% -95 - C2 -3B1N 4.7 ?
24 PsiBlast_CBE 70.1035% -96 - C2 -3B1Q - ? -
28 PsiBlast_CBE 70.0735% -94 - C2 -3B1R - ? -